HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:91.0 nTPM
GTEx:9.4 nTPM
FANTOM5:35.3 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:7.1 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041816
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.0
Sample id Sample description nTPM
Hippocampus
nTPM: 74.8
1911 Female, age 85, right hemisphere 90.7
2148 Female, age 91, left hemisphere 85.9
2621 Female, age 67, right hemisphere 72.9
1855 Male, age 76, left hemisphere 72.0
2529 Female, age 94, left hemisphere 71.7
1898 Male, age 80, left hemisphere 55.5
Dentate gyrus
nTPM: 75.7
2531 Female, age 67, both hemispheres 100.2
1927 Female, age 91, both hemispheres 87.4
2246 Female, age 85, both hemispheres 81.4
2528 Male, age 74, both hemispheres 67.2
2010 Male, age 76, both hemispheres 63.9
2530 Female, age 94, left hemisphere 54.1
Entorhinal gyrus
nTPM: 64.9
2764 Male, age 80, right hemisphere 68.5
2613 Female, age 94, left hemisphere 67.8
1938 Female, age 85, left hemisphere 66.7
2117 Female, age 91, right hemisphere 64.2
2686 Male, age 75, right hemisphere 62.7
1787 Male, age 76, left hemisphere 59.5
Hippocampus, CA1
nTPM: 85.1
2045 Male, age 76, both hemispheres 108.4
2749 Male, age 80, left hemisphere 87.3
2082 Female, age 91, right hemisphere 80.7
1873 Female, age 85, both hemispheres 80.5
2527 Male, age 74, both hemispheres 68.8
Hippocampus, CA2
nTPM: 65.8
2113 Female, age 91, right hemisphere 85.4
1940 Female, age 85, left hemisphere 74.4
2249 Male, age 74, both hemispheres 65.5
1963 Male, age 80, left hemisphere 58.2
2437 Female, age 94, left hemisphere 55.7
1892 Male, age 76, both hemispheres 55.3
Hippocampus, CA3
nTPM: 91.0
2137 Male, age 80, left hemisphere 130.7
2620 Female, age 94, left hemisphere 95.5
2861 Female, age 67, both hemispheres 92.0
2436 Male, age 74, both hemispheres 87.1
1867 Male, age 76, both hemispheres 70.8
1891 Female, age 85, both hemispheres 70.1
Parahippocampal cortex
nTPM: 72.3
2245 Female, age 91, both hemispheres 81.2
2018 Male, age 76, both hemispheres 76.3
2693 Female, age 94, both hemispheres 75.9
1850 Male, age 80, both hemispheres 74.7
2622 Female, age 67, right hemisphere 74.4
2532 Female, age 72, left hemisphere 73.7
1933 Female, age 85, both hemispheres 72.1
2250 Female, age 67, right hemisphere 69.9
2692 Male, age 74, both hemispheres 63.1
1990 Female, age 91, right hemisphere 61.6
Perirhinal gyrus
nTPM: 72.1
2521 Female, age 94, right hemisphere 77.7
1794 Male, age 80, right hemisphere 73.3
1841 Female, age 85, right hemisphere 71.8
2848 Male, age 76, right hemisphere 70.5
1847 Female, age 91, left hemisphere 67.3
Subiculum
nTPM: 67.7
2729 Female, age 91, right hemisphere 78.1
1901 Male, age 80, both hemispheres 76.5
2042 Male, age 76, both hemispheres 70.3
2619 Male, age 74, both hemispheres 62.1
2438 Female, age 94, left hemisphere 60.2
1977 Female, age 85, both hemispheres 59.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 18.5
Min nTPM: 3.3
Std nTPM: 3.0
Median nTPM: 9.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 18.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 18.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 16.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 15.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 15.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 15.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 15.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 15.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 15.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 15.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 15.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.3
FF:10169-103B7 60 years, female 36.3
FF:10153-102I9 76 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.7
Pig sample Sample description nTPM
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.5
Sample A Female 18.1
Sample B Female 14.5
Sample C Male 17.7
Sample D Male 16.5
Dorsal hippocampus
nTPM: 42.7
Samples: 4

Max nTPM: 56.2
Min nTPM: 27.4
Sample A Female 56.2
Sample B Female 45.5
Sample C Male 41.5
Sample D Male 27.4
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.9
Sample A Female 17.6
Sample B Female 20.1
Sample C Male 19.0
Sample D Male 16.9
Ventral hippocampus
nTPM: 37.6
Samples: 4

Max nTPM: 63.9
Min nTPM: 23.1
Sample A Female 29.5
Sample B Female 23.1
Sample C Male 34.0
Sample D Male 63.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.4
Sample A Male 5.9
Sample B Male 5.6
Sample C Female 5.4
Sample D Female 6.1
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.8
Sample A Male 5.8
Sample B Male 7.8
Sample C Female 7.6
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69980166 Antisense, RP_050512_04_A05, Mouse strain C57BL/6J (56 days, male) 2.8
71670698 Antisense, RP_050512_04_A05, Mouse strain C57BL/6J (56 days, male) 0.8

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