We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.9
nTPM
Monaco:
85.2
nTPM
Schmiedel:
951.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.9
HPA sample
nTPM
gdT-cell nTPM: 43.0
Samples: 6
Max nTPM: 59.6
Min nTPM: 31.3
P10809_1007
40.6
P10809_1022
31.3
P10809_1041
44.2
P10809_1060
45.1
P10809_1077
59.6
P10809_1098
37.1
MAIT T-cell nTPM: 53.0
Samples: 6
Max nTPM: 71.4
Min nTPM: 35.6
P10809_1006
35.6
P10809_1024
52.0
P10809_1043
52.0
P10809_1062
64.1
P10809_1083
71.4
P10809_1097
42.7
Memory CD4 T-cell nTPM: 52.0
Samples: 6
Max nTPM: 63.3
Min nTPM: 41.7
P10809_1014
53.5
P10809_1026
58.3
P10809_1045
41.7
P10809_1064
63.3
P10809_1086
52.0
P10809_1113
43.1
Memory CD8 T-cell nTPM: 43.2
Samples: 5
Max nTPM: 55.2
Min nTPM: 36.0
P10809_1012
45.1
P10809_1027
41.4
P10809_1046
38.5
P10809_1065
55.2
P10809_1111
36.0
Naive CD4 T-cell nTPM: 44.1
Samples: 6
Max nTPM: 60.4
Min nTPM: 35.5
P10809_1015
41.0
P10809_1030
47.4
P10809_1049
40.4
P10809_1068
60.4
P10809_1085
40.1
P10809_1112
35.5
Naive CD8 T-cell nTPM: 46.0
Samples: 6
Max nTPM: 63.9
Min nTPM: 39.6
P10809_1016
43.7
P10809_1031
43.7
P10809_1050
42.8
P10809_1069
63.9
P10809_1087
42.4
P10809_1110
39.6
T-reg nTPM: 69.9
Samples: 6
Max nTPM: 85.9
Min nTPM: 48.0
P10809_1018
55.2
P10809_1037
48.0
P10809_1056
83.9
P10809_1075
85.9
P10809_1094
73.2
P10809_1106
73.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.2
Samples: 4
Max nTPM: 104.4
Min nTPM: 64.5
RHH5202_R3573
64.5
RHH5230_R3602
104.4
RHH5259_R3631
68.0
RHH5288_R3660
75.8
Effector memory CD8 T-cell nTPM: 75.9
Samples: 4
Max nTPM: 88.2
Min nTPM: 56.5
RHH5203_R3574
74.2
RHH5231_R3603
84.5
RHH5260_R3632
88.2
RHH5289_R3661
56.5
MAIT T-cell nTPM: 77.4
Samples: 4
Max nTPM: 111.5
Min nTPM: 55.5
RHH5233_R3605
66.1
RHH5205_R3576
55.5
RHH5262_R3634
111.5
RHH5297_R3663
76.3
Memory CD4 T-cell TFH nTPM: 75.2
Samples: 4
Max nTPM: 106.1
Min nTPM: 62.7
RHH5300_R3666
62.7
RHH5236_R3608
106.1
RHH5265_R3637
63.5
RHH5208_R3579
68.4
Memory CD4 T-cell Th1 nTPM: 77.2
Samples: 4
Max nTPM: 91.9
Min nTPM: 48.7
RHH5210_R3581
48.7
RHH5302_R3668
82.8
RHH5238_R3610
85.4
RHH5267_R3639
91.9
Memory CD4 T-cell Th1/Th17 nTPM: 71.9
Samples: 4
Max nTPM: 119.3
Min nTPM: 49.0
RHH5303_R3669
59.4
RHH5211_R3582
59.8
RHH5239_R3611
49.0
RHH5268_R3640
119.3
Memory CD4 T-cell Th17 nTPM: 74.0
Samples: 4
Max nTPM: 104.1
Min nTPM: 34.9
RHH5304_R3670
54.0
RHH5212_R3583
104.1
RHH5240_R3612
34.9
RHH5269_R3641
103.1
Memory CD4 T-cell Th2 nTPM: 77.8
Samples: 4
Max nTPM: 107.2
Min nTPM: 56.8
RHH5305_R3671
56.8
RHH5213_R3584
71.8
RHH5241_R3613
75.3
RHH5270_R3642
107.2
Naive CD4 T-cell nTPM: 60.5
Samples: 4
Max nTPM: 76.8
Min nTPM: 49.2
RHH5306_R3672
60.3
RHH5214_R3585
76.8
RHH5242_R3614
49.2
RHH5271_R3643
55.6
Naive CD8 T-cell nTPM: 76.2
Samples: 4
Max nTPM: 80.9
Min nTPM: 70.7
RHH5201_R3572
70.7
RHH5229_R3601
77.6
RHH5258_R3630
80.9
RHH5287_R3659
75.5
Non-Vd2 gdTCR nTPM: 62.5
Samples: 4
Max nTPM: 81.1
Min nTPM: 41.4
RHH5235_R3607
81.1
RHH5264_R3636
41.4
RHH5207_R3578
57.8
RHH5299_R3665
69.5
T-reg nTPM: 85.2
Samples: 4
Max nTPM: 122.2
Min nTPM: 64.5
RHH5301_R3667
87.3
RHH5237_R3609
122.2
RHH5266_R3638
66.7
RHH5209_R3580
64.5
Terminal effector memory CD4 T-cell nTPM: 52.5
Samples: 2
Max nTPM: 65.0
Min nTPM: 40.0
RHH5243_R3615
65.0
RHH5272_R3644
40.0
Terminal effector memory CD8 T-cell nTPM: 72.9
Samples: 4
Max nTPM: 88.5
Min nTPM: 57.7
RHH5232_R3604
58.1
RHH5204_R3575
88.5
RHH5261_R3633
87.4
RHH5296_R3662
57.7
Vd2 gdTCR nTPM: 76.8
Samples: 4
Max nTPM: 88.0
Min nTPM: 64.5
RHH5234_R3606
88.0
RHH5206_R3577
77.5
RHH5263_R3635
64.5
RHH5298_R3664
77.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
