HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:55.9 nTPM
HPA Brain:124.9 nTPM
GTEx:55.9 nTPM
FANTOM5:185.9 Scaled Tags Per Million
Pig:71.8 nTPM
Mouse:81.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037175
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.9
Sample id Sample description nTPM
Hippocampus
nTPM: 113.6
2529 Female, age 94, left hemisphere 126.7
2148 Female, age 91, left hemisphere 124.8
1898 Male, age 80, left hemisphere 120.2
1911 Female, age 85, right hemisphere 106.2
2621 Female, age 67, right hemisphere 104.0
1855 Male, age 76, left hemisphere 99.5
Dentate gyrus
nTPM: 102.3
2528 Male, age 74, both hemispheres 133.3
1927 Female, age 91, both hemispheres 131.2
2246 Female, age 85, both hemispheres 92.9
2010 Male, age 76, both hemispheres 91.4
2530 Female, age 94, left hemisphere 84.1
2531 Female, age 67, both hemispheres 81.1
Entorhinal gyrus
nTPM: 103.3
2117 Female, age 91, right hemisphere 135.8
1787 Male, age 76, left hemisphere 111.7
1938 Female, age 85, left hemisphere 108.4
2764 Male, age 80, right hemisphere 103.1
2686 Male, age 75, right hemisphere 88.6
2613 Female, age 94, left hemisphere 71.8
Hippocampus, CA1
nTPM: 118.7
2749 Male, age 80, left hemisphere 166.3
2527 Male, age 74, both hemispheres 150.4
1873 Female, age 85, both hemispheres 112.3
2082 Female, age 91, right hemisphere 86.3
2045 Male, age 76, both hemispheres 78.3
Hippocampus, CA2
nTPM: 107.2
1963 Male, age 80, left hemisphere 140.4
2113 Female, age 91, right hemisphere 108.6
1892 Male, age 76, both hemispheres 106.5
2249 Male, age 74, both hemispheres 105.0
1940 Female, age 85, left hemisphere 97.8
2437 Female, age 94, left hemisphere 84.7
Hippocampus, CA3
nTPM: 106.9
2137 Male, age 80, left hemisphere 141.5
2436 Male, age 74, both hemispheres 109.5
2620 Female, age 94, left hemisphere 106.9
1891 Female, age 85, both hemispheres 99.4
2861 Female, age 67, both hemispheres 95.3
1867 Male, age 76, both hemispheres 88.6
Parahippocampal cortex
nTPM: 122.4
2622 Female, age 67, right hemisphere 152.8
2692 Male, age 74, both hemispheres 141.6
1850 Male, age 80, both hemispheres 132.6
2245 Female, age 91, both hemispheres 131.1
1933 Female, age 85, both hemispheres 122.7
2250 Female, age 67, right hemisphere 120.0
1990 Female, age 91, right hemisphere 113.5
2693 Female, age 94, both hemispheres 112.1
2532 Female, age 72, left hemisphere 105.3
2018 Male, age 76, both hemispheres 92.2
Perirhinal gyrus
nTPM: 124.9
1794 Male, age 80, right hemisphere 138.0
1847 Female, age 91, left hemisphere 137.6
1841 Female, age 85, right hemisphere 127.4
2521 Female, age 94, right hemisphere 116.7
2848 Male, age 76, right hemisphere 104.6
Subiculum
nTPM: 103.2
2619 Male, age 74, both hemispheres 178.4
2729 Female, age 91, right hemisphere 123.3
1977 Female, age 85, both hemispheres 91.5
1901 Male, age 80, both hemispheres 87.4
2438 Female, age 94, left hemisphere 74.0
2042 Male, age 76, both hemispheres 64.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.9
Samples: 197

Max nTPM: 128.4
Min nTPM: 10.8
Std nTPM: 22.7
Median nTPM: 54.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 128.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 107.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 106.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 105.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 103.0
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 99.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 97.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 95.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 94.4
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 93.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.9
FF:10169-103B7 60 years, female 214.9
FF:10153-102I9 76 years, female 156.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.8
Pig sample Sample description nTPM
Subiculum
nTPM: 71.8
Samples: 4

Max nTPM: 80.3
Min nTPM: 60.6
Sample A Female 80.3
Sample B Female 70.9
Sample C Male 75.3
Sample D Male 60.6
Dorsal hippocampus
nTPM: 57.1
Samples: 4

Max nTPM: 64.0
Min nTPM: 50.6
Sample A Female 64.0
Sample B Female 55.0
Sample C Male 58.8
Sample D Male 50.6
Entorhinal cortex
nTPM: 52.1
Samples: 4

Max nTPM: 60.3
Min nTPM: 43.9
Sample A Female 49.8
Sample B Female 60.3
Sample C Male 54.2
Sample D Male 43.9
Ventral hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 60.8
Min nTPM: 52.4
Sample A Female 52.4
Sample B Female 52.8
Sample C Male 60.8
Sample D Male 54.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.8
Samples: 4

Max nTPM: 88.4
Min nTPM: 73.0
Sample A Male 83.4
Sample B Male 82.4
Sample C Female 73.0
Sample D Female 88.4
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 67.3
Min nTPM: 57.6
Sample A Male 67.3
Sample B Male 62.7
Sample C Female 61.7
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
73513660 Antisense, RP_051121_02_E02, Mouse strain C57BL/6J (56 days, male) 1.3
74363355 Antisense, RP_051121_02_E02, Mouse strain C57BL/6J (56 days, male) 0.9

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