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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.3
nTPM
Monaco:
37.2
nTPM
Schmiedel:
48.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.3
HPA sample
nTPM
gdT-cell nTPM: 16.5
Samples: 6
Max nTPM: 28.0
Min nTPM: 5.1
P10809_1007
28.0
P10809_1022
16.9
P10809_1041
18.5
P10809_1060
5.1
P10809_1077
12.1
P10809_1098
18.2
MAIT T-cell nTPM: 17.0
Samples: 6
Max nTPM: 28.6
Min nTPM: 6.8
P10809_1006
25.8
P10809_1024
12.1
P10809_1043
14.8
P10809_1062
6.8
P10809_1083
13.9
P10809_1097
28.6
Memory CD4 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 37.3
Min nTPM: 8.4
P10809_1014
29.5
P10809_1026
35.6
P10809_1045
37.3
P10809_1064
23.1
P10809_1086
10.3
P10809_1113
8.4
Memory CD8 T-cell nTPM: 26.3
Samples: 5
Max nTPM: 40.7
Min nTPM: 8.4
P10809_1012
36.3
P10809_1027
8.4
P10809_1046
40.7
P10809_1065
19.3
P10809_1111
26.7
Naive CD4 T-cell nTPM: 21.9
Samples: 6
Max nTPM: 53.0
Min nTPM: 10.5
P10809_1015
23.7
P10809_1030
17.9
P10809_1049
53.0
P10809_1068
10.5
P10809_1085
13.9
P10809_1112
12.3
Naive CD8 T-cell nTPM: 16.6
Samples: 6
Max nTPM: 21.1
Min nTPM: 6.7
P10809_1016
21.1
P10809_1031
18.9
P10809_1050
16.0
P10809_1069
20.4
P10809_1087
6.7
P10809_1110
16.6
T-reg nTPM: 21.0
Samples: 6
Max nTPM: 50.6
Min nTPM: 11.3
P10809_1018
12.4
P10809_1037
18.5
P10809_1056
50.6
P10809_1075
11.8
P10809_1094
21.5
P10809_1106
11.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.6
Samples: 4
Max nTPM: 77.6
Min nTPM: 3.8
RHH5202_R3573
3.8
RHH5230_R3602
77.6
RHH5259_R3631
46.8
RHH5288_R3660
10.1
Effector memory CD8 T-cell nTPM: 31.5
Samples: 4
Max nTPM: 67.0
Min nTPM: 10.6
RHH5203_R3574
10.6
RHH5231_R3603
37.4
RHH5260_R3632
67.0
RHH5289_R3661
10.8
MAIT T-cell nTPM: 21.6
Samples: 4
Max nTPM: 57.0
Min nTPM: 3.0
RHH5233_R3605
3.0
RHH5205_R3576
14.7
RHH5262_R3634
57.0
RHH5297_R3663
11.5
Memory CD4 T-cell TFH nTPM: 28.7
Samples: 4
Max nTPM: 55.5
Min nTPM: 6.2
RHH5300_R3666
44.3
RHH5236_R3608
55.5
RHH5265_R3637
8.6
RHH5208_R3579
6.2
Memory CD4 T-cell Th1 nTPM: 30.0
Samples: 4
Max nTPM: 60.3
Min nTPM: 7.8
RHH5210_R3581
7.8
RHH5302_R3668
9.2
RHH5238_R3610
42.7
RHH5267_R3639
60.3
Memory CD4 T-cell Th1/Th17 nTPM: 26.6
Samples: 4
Max nTPM: 60.3
Min nTPM: 3.6
RHH5303_R3669
3.6
RHH5211_R3582
30.4
RHH5239_R3611
12.2
RHH5268_R3640
60.3
Memory CD4 T-cell Th17 nTPM: 34.6
Samples: 4
Max nTPM: 63.6
Min nTPM: 5.7
RHH5304_R3670
5.8
RHH5212_R3583
63.4
RHH5240_R3612
5.7
RHH5269_R3641
63.6
Memory CD4 T-cell Th2 nTPM: 31.8
Samples: 4
Max nTPM: 64.1
Min nTPM: 5.2
RHH5305_R3671
17.1
RHH5213_R3584
40.9
RHH5241_R3613
5.2
RHH5270_R3642
64.1
Naive CD4 T-cell nTPM: 27.0
Samples: 4
Max nTPM: 39.3
Min nTPM: 7.1
RHH5306_R3672
32.1
RHH5214_R3585
39.3
RHH5242_R3614
7.1
RHH5271_R3643
29.3
Naive CD8 T-cell nTPM: 28.9
Samples: 4
Max nTPM: 57.1
Min nTPM: 4.0
RHH5201_R3572
4.0
RHH5229_R3601
57.1
RHH5258_R3630
34.8
RHH5287_R3659
19.5
Non-Vd2 gdTCR nTPM: 28.3
Samples: 4
Max nTPM: 61.5
Min nTPM: 4.9
RHH5235_R3607
61.5
RHH5264_R3636
6.2
RHH5207_R3578
4.9
RHH5299_R3665
40.7
T-reg nTPM: 37.2
Samples: 4
Max nTPM: 50.8
Min nTPM: 25.6
RHH5301_R3667
25.6
RHH5237_R3609
50.8
RHH5266_R3638
42.9
RHH5209_R3580
29.5
Terminal effector memory CD4 T-cell nTPM: 24.6
Samples: 2
Max nTPM: 39.2
Min nTPM: 10.0
RHH5243_R3615
39.2
RHH5272_R3644
10.0
Terminal effector memory CD8 T-cell nTPM: 21.0
Samples: 4
Max nTPM: 55.6
Min nTPM: 3.8
RHH5232_R3604
8.5
RHH5204_R3575
16.1
RHH5261_R3633
55.6
RHH5296_R3662
3.8
Vd2 gdTCR nTPM: 18.3
Samples: 4
Max nTPM: 28.5
Min nTPM: 11.5
RHH5234_R3606
16.3
RHH5206_R3577
11.5
RHH5263_R3635
16.9
RHH5298_R3664
28.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
