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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.1
nTPM
Monaco:
178.4
nTPM
Schmiedel:
85.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.1
HPA sample
nTPM
gdT-cell nTPM: 105.3
Samples: 6
Max nTPM: 134.2
Min nTPM: 67.9
P10809_1007
67.9
P10809_1022
134.2
P10809_1041
130.8
P10809_1060
95.7
P10809_1077
90.8
P10809_1098
112.6
MAIT T-cell nTPM: 93.5
Samples: 6
Max nTPM: 131.4
Min nTPM: 44.1
P10809_1006
44.1
P10809_1024
131.4
P10809_1043
104.8
P10809_1062
100.6
P10809_1083
98.5
P10809_1097
81.7
Memory CD4 T-cell nTPM: 98.7
Samples: 6
Max nTPM: 114.2
Min nTPM: 59.3
P10809_1014
59.3
P10809_1026
111.9
P10809_1045
94.9
P10809_1064
109.2
P10809_1086
114.2
P10809_1113
102.6
Memory CD8 T-cell nTPM: 103.2
Samples: 5
Max nTPM: 126.4
Min nTPM: 58.1
P10809_1012
58.1
P10809_1027
99.7
P10809_1046
126.4
P10809_1065
115.6
P10809_1111
116.2
Naive CD4 T-cell nTPM: 63.6
Samples: 6
Max nTPM: 88.1
Min nTPM: 35.9
P10809_1015
35.9
P10809_1030
68.3
P10809_1049
79.0
P10809_1068
50.2
P10809_1085
88.1
P10809_1112
60.3
Naive CD8 T-cell nTPM: 88.2
Samples: 6
Max nTPM: 125.4
Min nTPM: 41.9
P10809_1016
41.9
P10809_1031
83.0
P10809_1050
90.2
P10809_1069
108.0
P10809_1087
125.4
P10809_1110
80.9
T-reg nTPM: 114.1
Samples: 6
Max nTPM: 182.9
Min nTPM: 62.8
P10809_1018
62.8
P10809_1037
98.9
P10809_1056
182.9
P10809_1075
125.8
P10809_1094
122.2
P10809_1106
91.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.3
Samples: 4
Max nTPM: 113.5
Min nTPM: 52.1
RHH5202_R3573
113.5
RHH5230_R3602
66.6
RHH5259_R3631
52.1
RHH5288_R3660
81.1
Effector memory CD8 T-cell nTPM: 136.5
Samples: 4
Max nTPM: 173.1
Min nTPM: 116.6
RHH5203_R3574
127.4
RHH5231_R3603
173.1
RHH5260_R3632
116.6
RHH5289_R3661
128.9
MAIT T-cell nTPM: 114.8
Samples: 4
Max nTPM: 127.7
Min nTPM: 90.9
RHH5233_R3605
90.9
RHH5205_R3576
120.7
RHH5262_R3634
119.8
RHH5297_R3663
127.7
Memory CD4 T-cell TFH nTPM: 110.5
Samples: 4
Max nTPM: 159.7
Min nTPM: 75.7
RHH5300_R3666
109.0
RHH5236_R3608
159.7
RHH5265_R3637
97.6
RHH5208_R3579
75.7
Memory CD4 T-cell Th1 nTPM: 72.4
Samples: 4
Max nTPM: 107.4
Min nTPM: 57.5
RHH5210_R3581
63.2
RHH5302_R3668
107.4
RHH5238_R3610
57.5
RHH5267_R3639
61.6
Memory CD4 T-cell Th1/Th17 nTPM: 111.6
Samples: 4
Max nTPM: 162.4
Min nTPM: 55.9
RHH5303_R3669
162.4
RHH5211_R3582
131.2
RHH5239_R3611
55.9
RHH5268_R3640
97.0
Memory CD4 T-cell Th17 nTPM: 99.1
Samples: 4
Max nTPM: 119.2
Min nTPM: 68.2
RHH5304_R3670
116.3
RHH5212_R3583
119.2
RHH5240_R3612
92.5
RHH5269_R3641
68.2
Memory CD4 T-cell Th2 nTPM: 118.9
Samples: 4
Max nTPM: 141.1
Min nTPM: 104.2
RHH5305_R3671
141.1
RHH5213_R3584
114.3
RHH5241_R3613
115.9
RHH5270_R3642
104.2
Naive CD4 T-cell nTPM: 60.6
Samples: 4
Max nTPM: 74.8
Min nTPM: 47.0
RHH5306_R3672
68.8
RHH5214_R3585
74.8
RHH5242_R3614
47.0
RHH5271_R3643
51.8
Naive CD8 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 63.9
Min nTPM: 37.3
RHH5201_R3572
63.9
RHH5229_R3601
37.3
RHH5258_R3630
63.1
RHH5287_R3659
50.7
Non-Vd2 gdTCR nTPM: 178.4
Samples: 4
Max nTPM: 227.8
Min nTPM: 95.3
RHH5235_R3607
95.3
RHH5264_R3636
227.8
RHH5207_R3578
188.5
RHH5299_R3665
201.8
T-reg nTPM: 109.3
Samples: 4
Max nTPM: 167.4
Min nTPM: 68.9
RHH5301_R3667
117.1
RHH5237_R3609
167.4
RHH5266_R3638
83.7
RHH5209_R3580
68.9
Terminal effector memory CD4 T-cell nTPM: 127.1
Samples: 2
Max nTPM: 162.0
Min nTPM: 92.2
RHH5243_R3615
92.2
RHH5272_R3644
162.0
Terminal effector memory CD8 T-cell nTPM: 173.0
Samples: 4
Max nTPM: 230.7
Min nTPM: 139.8
RHH5232_R3604
172.0
RHH5204_R3575
139.8
RHH5261_R3633
149.4
RHH5296_R3662
230.7
Vd2 gdTCR nTPM: 137.0
Samples: 4
Max nTPM: 202.2
Min nTPM: 98.2
RHH5234_R3606
101.8
RHH5206_R3577
202.2
RHH5263_R3635
98.2
RHH5298_R3664
145.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
