We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
37.5
nTPM
Monaco:
164.7
nTPM
Schmiedel:
179.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.5
HPA sample
nTPM
gdT-cell nTPM: 26.6
Samples: 6
Max nTPM: 36.8
Min nTPM: 17.1
P10809_1007
17.1
P10809_1022
36.8
P10809_1041
27.2
P10809_1060
18.5
P10809_1077
29.0
P10809_1098
30.7
MAIT T-cell nTPM: 21.0
Samples: 6
Max nTPM: 27.8
Min nTPM: 14.8
P10809_1006
24.1
P10809_1024
22.1
P10809_1043
18.3
P10809_1062
14.8
P10809_1083
19.0
P10809_1097
27.8
Memory CD4 T-cell nTPM: 26.1
Samples: 6
Max nTPM: 40.7
Min nTPM: 15.5
P10809_1014
25.4
P10809_1026
24.8
P10809_1045
27.0
P10809_1064
15.5
P10809_1086
23.2
P10809_1113
40.7
Memory CD8 T-cell nTPM: 24.8
Samples: 5
Max nTPM: 32.9
Min nTPM: 13.4
P10809_1012
31.8
P10809_1027
32.9
P10809_1046
21.3
P10809_1065
13.4
P10809_1111
24.7
Naive CD4 T-cell nTPM: 9.5
Samples: 6
Max nTPM: 17.1
Min nTPM: 4.3
P10809_1015
11.6
P10809_1030
4.3
P10809_1049
10.0
P10809_1068
6.6
P10809_1085
7.5
P10809_1112
17.1
Naive CD8 T-cell nTPM: 15.4
Samples: 6
Max nTPM: 19.2
Min nTPM: 7.4
P10809_1016
15.1
P10809_1031
7.4
P10809_1050
15.5
P10809_1069
16.7
P10809_1087
19.2
P10809_1110
18.2
T-reg nTPM: 37.5
Samples: 6
Max nTPM: 52.2
Min nTPM: 15.8
P10809_1018
39.2
P10809_1037
33.7
P10809_1056
52.2
P10809_1075
15.8
P10809_1094
46.7
P10809_1106
37.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 122.4
Samples: 4
Max nTPM: 146.3
Min nTPM: 98.0
RHH5202_R3573
120.2
RHH5230_R3602
146.3
RHH5259_R3631
124.9
RHH5288_R3660
98.0
Effector memory CD8 T-cell nTPM: 136.9
Samples: 4
Max nTPM: 185.6
Min nTPM: 114.1
RHH5203_R3574
118.0
RHH5231_R3603
185.6
RHH5260_R3632
129.9
RHH5289_R3661
114.1
MAIT T-cell nTPM: 82.4
Samples: 4
Max nTPM: 128.5
Min nTPM: 52.1
RHH5233_R3605
128.5
RHH5205_R3576
85.7
RHH5262_R3634
63.4
RHH5297_R3663
52.1
Memory CD4 T-cell TFH nTPM: 127.3
Samples: 4
Max nTPM: 166.9
Min nTPM: 110.0
RHH5300_R3666
115.3
RHH5236_R3608
166.9
RHH5265_R3637
110.0
RHH5208_R3579
116.9
Memory CD4 T-cell Th1 nTPM: 121.7
Samples: 4
Max nTPM: 174.3
Min nTPM: 87.4
RHH5210_R3581
87.4
RHH5302_R3668
101.3
RHH5238_R3610
174.3
RHH5267_R3639
123.6
Memory CD4 T-cell Th1/Th17 nTPM: 153.0
Samples: 4
Max nTPM: 204.8
Min nTPM: 128.7
RHH5303_R3669
128.7
RHH5211_R3582
146.6
RHH5239_R3611
204.8
RHH5268_R3640
132.0
Memory CD4 T-cell Th17 nTPM: 164.7
Samples: 4
Max nTPM: 243.3
Min nTPM: 113.1
RHH5304_R3670
113.1
RHH5212_R3583
173.1
RHH5240_R3612
243.3
RHH5269_R3641
129.2
Memory CD4 T-cell Th2 nTPM: 126.8
Samples: 4
Max nTPM: 145.9
Min nTPM: 97.2
RHH5305_R3671
97.2
RHH5213_R3584
145.9
RHH5241_R3613
142.6
RHH5270_R3642
121.5
Naive CD4 T-cell nTPM: 54.6
Samples: 4
Max nTPM: 80.7
Min nTPM: 40.3
RHH5306_R3672
43.0
RHH5214_R3585
40.3
RHH5242_R3614
80.7
RHH5271_R3643
54.5
Naive CD8 T-cell nTPM: 74.9
Samples: 4
Max nTPM: 136.1
Min nTPM: 46.9
RHH5201_R3572
46.9
RHH5229_R3601
136.1
RHH5258_R3630
62.0
RHH5287_R3659
54.5
Non-Vd2 gdTCR nTPM: 117.1
Samples: 4
Max nTPM: 181.7
Min nTPM: 60.2
RHH5235_R3607
181.7
RHH5264_R3636
75.6
RHH5207_R3578
150.9
RHH5299_R3665
60.2
T-reg nTPM: 98.5
Samples: 4
Max nTPM: 140.6
Min nTPM: 76.3
RHH5301_R3667
81.2
RHH5237_R3609
140.6
RHH5266_R3638
76.3
RHH5209_R3580
95.9
Terminal effector memory CD4 T-cell nTPM: 118.5
Samples: 2
Max nTPM: 163.8
Min nTPM: 73.2
RHH5243_R3615
163.8
RHH5272_R3644
73.2
Terminal effector memory CD8 T-cell nTPM: 122.7
Samples: 4
Max nTPM: 180.9
Min nTPM: 101.5
RHH5232_R3604
180.9
RHH5204_R3575
106.5
RHH5261_R3633
101.5
RHH5296_R3662
101.7
Vd2 gdTCR nTPM: 128.9
Samples: 4
Max nTPM: 223.5
Min nTPM: 75.9
RHH5234_R3606
223.5
RHH5206_R3577
129.7
RHH5263_R3635
86.4
RHH5298_R3664
75.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
