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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
29.0
nTPM
Monaco:
227.3
nTPM
Schmiedel:
186.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.0
HPA sample
nTPM
gdT-cell nTPM: 28.9
Samples: 6
Max nTPM: 34.4
Min nTPM: 20.8
P10809_1007
20.8
P10809_1022
30.4
P10809_1041
34.4
P10809_1060
27.9
P10809_1077
28.5
P10809_1098
31.3
MAIT T-cell nTPM: 29.0
Samples: 6
Max nTPM: 35.1
Min nTPM: 25.3
P10809_1006
25.3
P10809_1024
27.0
P10809_1043
29.7
P10809_1062
26.9
P10809_1083
35.1
P10809_1097
30.0
Memory CD4 T-cell nTPM: 22.2
Samples: 6
Max nTPM: 30.2
Min nTPM: 15.2
P10809_1014
18.8
P10809_1026
22.7
P10809_1045
15.2
P10809_1064
24.6
P10809_1086
30.2
P10809_1113
21.6
Memory CD8 T-cell nTPM: 23.7
Samples: 5
Max nTPM: 34.3
Min nTPM: 17.6
P10809_1012
17.6
P10809_1027
18.9
P10809_1046
22.6
P10809_1065
25.1
P10809_1111
34.3
Naive CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 17.8
Min nTPM: 14.6
P10809_1015
17.8
P10809_1030
15.4
P10809_1049
14.6
P10809_1068
16.1
P10809_1085
17.8
P10809_1112
15.9
Naive CD8 T-cell nTPM: 23.9
Samples: 6
Max nTPM: 40.1
Min nTPM: 15.6
P10809_1016
15.6
P10809_1031
18.0
P10809_1050
20.0
P10809_1069
26.0
P10809_1087
40.1
P10809_1110
23.7
T-reg nTPM: 26.3
Samples: 6
Max nTPM: 32.3
Min nTPM: 20.4
P10809_1018
20.4
P10809_1037
23.0
P10809_1056
32.3
P10809_1075
22.0
P10809_1094
30.9
P10809_1106
29.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
227.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 93.9
Samples: 4
Max nTPM: 118.2
Min nTPM: 72.2
RHH5202_R3573
118.2
RHH5230_R3602
98.3
RHH5259_R3631
72.2
RHH5288_R3660
86.8
Effector memory CD8 T-cell nTPM: 135.1
Samples: 4
Max nTPM: 168.5
Min nTPM: 98.7
RHH5203_R3574
168.5
RHH5231_R3603
131.4
RHH5260_R3632
98.7
RHH5289_R3661
141.9
MAIT T-cell nTPM: 131.8
Samples: 4
Max nTPM: 163.2
Min nTPM: 103.1
RHH5233_R3605
151.4
RHH5205_R3576
163.2
RHH5262_R3634
109.4
RHH5297_R3663
103.1
Memory CD4 T-cell TFH nTPM: 84.8
Samples: 4
Max nTPM: 105.4
Min nTPM: 70.0
RHH5300_R3666
70.0
RHH5236_R3608
75.7
RHH5265_R3637
88.1
RHH5208_R3579
105.4
Memory CD4 T-cell Th1 nTPM: 71.2
Samples: 4
Max nTPM: 79.1
Min nTPM: 59.7
RHH5210_R3581
75.6
RHH5302_R3668
70.4
RHH5238_R3610
59.7
RHH5267_R3639
79.1
Memory CD4 T-cell Th1/Th17 nTPM: 77.5
Samples: 4
Max nTPM: 95.2
Min nTPM: 55.2
RHH5303_R3669
92.1
RHH5211_R3582
95.2
RHH5239_R3611
55.2
RHH5268_R3640
67.3
Memory CD4 T-cell Th17 nTPM: 83.2
Samples: 4
Max nTPM: 89.9
Min nTPM: 70.7
RHH5304_R3670
89.9
RHH5212_R3583
70.7
RHH5240_R3612
83.9
RHH5269_R3641
88.1
Memory CD4 T-cell Th2 nTPM: 80.3
Samples: 4
Max nTPM: 82.3
Min nTPM: 78.6
RHH5305_R3671
82.3
RHH5213_R3584
81.2
RHH5241_R3613
79.1
RHH5270_R3642
78.6
Naive CD4 T-cell nTPM: 61.1
Samples: 4
Max nTPM: 77.6
Min nTPM: 44.9
RHH5306_R3672
59.8
RHH5214_R3585
61.9
RHH5242_R3614
44.9
RHH5271_R3643
77.6
Naive CD8 T-cell nTPM: 77.8
Samples: 4
Max nTPM: 115.4
Min nTPM: 59.6
RHH5201_R3572
115.4
RHH5229_R3601
59.6
RHH5258_R3630
66.7
RHH5287_R3659
69.3
Non-Vd2 gdTCR nTPM: 227.3
Samples: 4
Max nTPM: 286.0
Min nTPM: 175.9
RHH5235_R3607
286.0
RHH5264_R3636
271.3
RHH5207_R3578
176.0
RHH5299_R3665
175.9
T-reg nTPM: 83.7
Samples: 4
Max nTPM: 98.5
Min nTPM: 64.1
RHH5301_R3667
79.5
RHH5237_R3609
64.1
RHH5266_R3638
92.7
RHH5209_R3580
98.5
Terminal effector memory CD4 T-cell nTPM: 151.8
Samples: 2
Max nTPM: 186.4
Min nTPM: 117.1
RHH5243_R3615
186.4
RHH5272_R3644
117.1
Terminal effector memory CD8 T-cell nTPM: 159.1
Samples: 4
Max nTPM: 181.3
Min nTPM: 135.8
RHH5232_R3604
167.0
RHH5204_R3575
135.8
RHH5261_R3633
181.3
RHH5296_R3662
152.3
Vd2 gdTCR nTPM: 125.4
Samples: 4
Max nTPM: 143.0
Min nTPM: 99.0
RHH5234_R3606
122.0
RHH5206_R3577
143.0
RHH5263_R3635
137.4
RHH5298_R3664
99.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
