HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:27.6 nTPM
HPA Brain:28.8 nTPM
GTEx:27.6 nTPM
FANTOM5:64.3 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:23.2 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023929
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.8
Sample id Sample description nTPM
Hippocampus
nTPM: 28.8
1898 Male, age 80, left hemisphere 34.6
1855 Male, age 76, left hemisphere 30.4
1911 Female, age 85, right hemisphere 30.0
2529 Female, age 94, left hemisphere 30.0
2621 Female, age 67, right hemisphere 26.0
2148 Female, age 91, left hemisphere 21.6
Dentate gyrus
nTPM: 27.5
2010 Male, age 76, both hemispheres 33.3
2530 Female, age 94, left hemisphere 30.3
2528 Male, age 74, both hemispheres 28.5
2246 Female, age 85, both hemispheres 25.6
1927 Female, age 91, both hemispheres 25.5
2531 Female, age 67, both hemispheres 21.5
Entorhinal gyrus
nTPM: 23.9
2117 Female, age 91, right hemisphere 32.4
1938 Female, age 85, left hemisphere 27.2
1787 Male, age 76, left hemisphere 24.8
2686 Male, age 75, right hemisphere 20.8
2613 Female, age 94, left hemisphere 19.7
2764 Male, age 80, right hemisphere 18.7
Hippocampus, CA1
nTPM: 26.7
2527 Male, age 74, both hemispheres 29.6
1873 Female, age 85, both hemispheres 28.8
2045 Male, age 76, both hemispheres 26.4
2082 Female, age 91, right hemisphere 24.7
2749 Male, age 80, left hemisphere 23.9
Hippocampus, CA2
nTPM: 28.4
2249 Male, age 74, both hemispheres 32.4
1940 Female, age 85, left hemisphere 30.6
1963 Male, age 80, left hemisphere 29.0
2437 Female, age 94, left hemisphere 26.8
1892 Male, age 76, both hemispheres 26.7
2113 Female, age 91, right hemisphere 25.1
Hippocampus, CA3
nTPM: 27.4
2436 Male, age 74, both hemispheres 36.6
1891 Female, age 85, both hemispheres 32.4
1867 Male, age 76, both hemispheres 29.7
2861 Female, age 67, both hemispheres 24.8
2137 Male, age 80, left hemisphere 22.9
2620 Female, age 94, left hemisphere 18.2
Parahippocampal cortex
nTPM: 24.9
2250 Female, age 67, right hemisphere 28.5
2018 Male, age 76, both hemispheres 28.1
1933 Female, age 85, both hemispheres 26.4
1850 Male, age 80, both hemispheres 26.1
2693 Female, age 94, both hemispheres 26.1
2692 Male, age 74, both hemispheres 25.2
1990 Female, age 91, right hemisphere 25.1
2245 Female, age 91, both hemispheres 22.4
2532 Female, age 72, left hemisphere 22.0
2622 Female, age 67, right hemisphere 18.9
Perirhinal gyrus
nTPM: 24.4
1841 Female, age 85, right hemisphere 28.5
2848 Male, age 76, right hemisphere 25.6
2521 Female, age 94, right hemisphere 23.1
1847 Female, age 91, left hemisphere 22.7
1794 Male, age 80, right hemisphere 22.2
Subiculum
nTPM: 27.7
2042 Male, age 76, both hemispheres 33.4
1901 Male, age 80, both hemispheres 29.1
2729 Female, age 91, right hemisphere 28.6
1977 Female, age 85, both hemispheres 27.4
2438 Female, age 94, left hemisphere 27.4
2619 Male, age 74, both hemispheres 20.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 74.1
Min nTPM: 11.3
Std nTPM: 9.4
Median nTPM: 26.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 74.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 53.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 51.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 50.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 47.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 46.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 46.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 45.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 44.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.3
FF:10153-102I9 76 years, female 80.9
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 19.9
Sample A Female 27.7
Sample B Female 19.9
Sample C Male 19.9
Sample D Male 25.2
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 27.2
Min nTPM: 15.4
Sample A Female 27.2
Sample B Female 18.3
Sample C Male 24.4
Sample D Male 15.4
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 24.5
Min nTPM: 16.2
Sample A Female 24.5
Sample B Female 21.8
Sample C Male 23.1
Sample D Male 16.2
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.3
Sample A Female 22.9
Sample B Female 19.3
Sample C Male 20.5
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 21.2
Sample A Male 21.4
Sample B Male 21.2
Sample C Female 23.2
Sample D Female 23.7
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 25.1
Min nTPM: 21.2
Sample A Male 25.1
Sample B Male 21.2
Sample C Female 23.2
Sample D Female 23.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
513019 Antisense, RP_040810_01_A10, Mouse strain C57BL/6J (56 days, male) 2.2

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