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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
153.8
nTPM
Monaco:
343.9
nTPM
Schmiedel:
264.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.8
HPA sample
nTPM
gdT-cell nTPM: 121.0
Samples: 6
Max nTPM: 155.3
Min nTPM: 59.6
P10809_1007
107.5
P10809_1022
152.0
P10809_1041
115.8
P10809_1060
59.6
P10809_1077
155.3
P10809_1098
136.0
MAIT T-cell nTPM: 153.8
Samples: 6
Max nTPM: 180.1
Min nTPM: 125.4
P10809_1006
180.1
P10809_1024
144.3
P10809_1043
131.7
P10809_1062
125.4
P10809_1083
173.5
P10809_1097
167.7
Memory CD4 T-cell nTPM: 132.4
Samples: 6
Max nTPM: 163.4
Min nTPM: 111.7
P10809_1014
141.6
P10809_1026
116.9
P10809_1045
121.2
P10809_1064
139.8
P10809_1086
163.4
P10809_1113
111.7
Memory CD8 T-cell nTPM: 137.6
Samples: 5
Max nTPM: 159.0
Min nTPM: 112.5
P10809_1012
159.0
P10809_1027
114.7
P10809_1046
112.5
P10809_1065
149.0
P10809_1111
152.6
Naive CD4 T-cell nTPM: 119.9
Samples: 6
Max nTPM: 142.6
Min nTPM: 100.3
P10809_1015
123.7
P10809_1030
109.4
P10809_1049
100.3
P10809_1068
127.2
P10809_1085
142.6
P10809_1112
116.4
Naive CD8 T-cell nTPM: 125.5
Samples: 6
Max nTPM: 151.3
Min nTPM: 101.2
P10809_1016
107.9
P10809_1031
124.1
P10809_1050
101.2
P10809_1069
151.3
P10809_1087
137.1
P10809_1110
131.5
T-reg nTPM: 147.2
Samples: 6
Max nTPM: 185.6
Min nTPM: 95.4
P10809_1018
163.6
P10809_1037
154.4
P10809_1056
119.5
P10809_1075
164.6
P10809_1094
95.4
P10809_1106
185.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
343.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 272.2
Samples: 4
Max nTPM: 367.1
Min nTPM: 159.6
RHH5202_R3573
159.6
RHH5230_R3602
320.2
RHH5259_R3631
367.1
RHH5288_R3660
241.7
Effector memory CD8 T-cell nTPM: 296.0
Samples: 4
Max nTPM: 373.1
Min nTPM: 192.1
RHH5203_R3574
265.3
RHH5231_R3603
353.6
RHH5260_R3632
373.1
RHH5289_R3661
192.1
MAIT T-cell nTPM: 331.4
Samples: 4
Max nTPM: 395.9
Min nTPM: 282.7
RHH5233_R3605
296.7
RHH5205_R3576
395.9
RHH5262_R3634
350.3
RHH5297_R3663
282.7
Memory CD4 T-cell TFH nTPM: 266.4
Samples: 4
Max nTPM: 405.7
Min nTPM: 144.3
RHH5300_R3666
254.7
RHH5236_R3608
405.7
RHH5265_R3637
260.8
RHH5208_R3579
144.3
Memory CD4 T-cell Th1 nTPM: 267.8
Samples: 4
Max nTPM: 397.1
Min nTPM: 187.5
RHH5210_R3581
190.2
RHH5302_R3668
187.5
RHH5238_R3610
397.1
RHH5267_R3639
296.3
Memory CD4 T-cell Th1/Th17 nTPM: 315.4
Samples: 4
Max nTPM: 516.3
Min nTPM: 149.2
RHH5303_R3669
149.2
RHH5211_R3582
309.3
RHH5239_R3611
516.3
RHH5268_R3640
286.9
Memory CD4 T-cell Th17 nTPM: 342.9
Samples: 4
Max nTPM: 500.7
Min nTPM: 232.6
RHH5304_R3670
232.6
RHH5212_R3583
300.9
RHH5240_R3612
500.7
RHH5269_R3641
337.3
Memory CD4 T-cell Th2 nTPM: 343.9
Samples: 4
Max nTPM: 418.5
Min nTPM: 311.1
RHH5305_R3671
311.1
RHH5213_R3584
418.5
RHH5241_R3613
332.3
RHH5270_R3642
313.7
Naive CD4 T-cell nTPM: 249.8
Samples: 4
Max nTPM: 270.1
Min nTPM: 233.7
RHH5306_R3672
233.7
RHH5214_R3585
240.6
RHH5242_R3614
254.9
RHH5271_R3643
270.1
Naive CD8 T-cell nTPM: 240.1
Samples: 4
Max nTPM: 300.6
Min nTPM: 124.7
RHH5201_R3572
124.7
RHH5229_R3601
280.0
RHH5258_R3630
255.2
RHH5287_R3659
300.6
Non-Vd2 gdTCR nTPM: 278.8
Samples: 4
Max nTPM: 420.0
Min nTPM: 194.8
RHH5235_R3607
420.0
RHH5264_R3636
245.9
RHH5207_R3578
194.8
RHH5299_R3665
254.3
T-reg nTPM: 310.8
Samples: 4
Max nTPM: 403.1
Min nTPM: 245.7
RHH5301_R3667
245.7
RHH5237_R3609
403.1
RHH5266_R3638
292.7
RHH5209_R3580
301.6
Terminal effector memory CD4 T-cell nTPM: 325.7
Samples: 2
Max nTPM: 398.6
Min nTPM: 252.7
RHH5243_R3615
398.6
RHH5272_R3644
252.7
Terminal effector memory CD8 T-cell nTPM: 274.4
Samples: 4
Max nTPM: 389.7
Min nTPM: 157.3
RHH5232_R3604
299.6
RHH5204_R3575
250.8
RHH5261_R3633
389.7
RHH5296_R3662
157.3
Vd2 gdTCR nTPM: 307.4
Samples: 4
Max nTPM: 362.5
Min nTPM: 271.2
RHH5234_R3606
295.9
RHH5206_R3577
299.9
RHH5263_R3635
362.5
RHH5298_R3664
271.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
