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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.1
nTPM
Monaco:
28.8
nTPM
Schmiedel:
52.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.1
HPA sample
nTPM
gdT-cell nTPM: 18.1
Samples: 6
Max nTPM: 22.3
Min nTPM: 9.7
P10809_1007
19.3
P10809_1022
18.2
P10809_1041
9.7
P10809_1060
21.5
P10809_1077
22.3
P10809_1098
17.5
MAIT T-cell nTPM: 20.5
Samples: 6
Max nTPM: 32.0
Min nTPM: 11.3
P10809_1006
11.3
P10809_1024
20.5
P10809_1043
16.1
P10809_1062
20.0
P10809_1083
32.0
P10809_1097
23.1
Memory CD4 T-cell nTPM: 22.6
Samples: 6
Max nTPM: 31.7
Min nTPM: 12.8
P10809_1014
12.8
P10809_1026
22.2
P10809_1045
16.9
P10809_1064
31.7
P10809_1086
28.5
P10809_1113
23.5
Memory CD8 T-cell nTPM: 20.0
Samples: 5
Max nTPM: 29.2
Min nTPM: 11.6
P10809_1012
11.6
P10809_1027
20.7
P10809_1046
16.7
P10809_1065
29.2
P10809_1111
21.9
Naive CD4 T-cell nTPM: 25.1
Samples: 6
Max nTPM: 37.0
Min nTPM: 17.4
P10809_1015
17.9
P10809_1030
25.2
P10809_1049
27.1
P10809_1068
26.1
P10809_1085
37.0
P10809_1112
17.4
Naive CD8 T-cell nTPM: 21.7
Samples: 6
Max nTPM: 28.1
Min nTPM: 17.6
P10809_1016
18.8
P10809_1031
28.1
P10809_1050
17.6
P10809_1069
21.3
P10809_1087
23.0
P10809_1110
21.3
T-reg nTPM: 22.0
Samples: 6
Max nTPM: 38.9
Min nTPM: 10.1
P10809_1018
10.1
P10809_1037
12.5
P10809_1056
29.8
P10809_1075
38.9
P10809_1094
20.7
P10809_1106
19.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.9
Samples: 4
Max nTPM: 25.3
Min nTPM: 15.9
RHH5202_R3573
16.4
RHH5230_R3602
25.3
RHH5259_R3631
15.9
RHH5288_R3660
22.1
Effector memory CD8 T-cell nTPM: 16.2
Samples: 4
Max nTPM: 26.3
Min nTPM: 9.8
RHH5203_R3574
26.3
RHH5231_R3603
17.5
RHH5260_R3632
9.8
RHH5289_R3661
11.0
MAIT T-cell nTPM: 13.0
Samples: 4
Max nTPM: 18.9
Min nTPM: 4.7
RHH5233_R3605
18.9
RHH5205_R3576
4.7
RHH5262_R3634
9.6
RHH5297_R3663
18.8
Memory CD4 T-cell TFH nTPM: 28.8
Samples: 4
Max nTPM: 33.7
Min nTPM: 25.7
RHH5300_R3666
25.7
RHH5236_R3608
28.5
RHH5265_R3637
27.2
RHH5208_R3579
33.7
Memory CD4 T-cell Th1 nTPM: 18.6
Samples: 4
Max nTPM: 25.5
Min nTPM: 5.4
RHH5210_R3581
25.5
RHH5302_R3668
18.9
RHH5238_R3610
5.4
RHH5267_R3639
24.7
Memory CD4 T-cell Th1/Th17 nTPM: 17.0
Samples: 4
Max nTPM: 23.2
Min nTPM: 7.4
RHH5303_R3669
21.1
RHH5211_R3582
23.2
RHH5239_R3611
16.3
RHH5268_R3640
7.4
Memory CD4 T-cell Th17 nTPM: 16.7
Samples: 4
Max nTPM: 30.7
Min nTPM: 5.6
RHH5304_R3670
11.5
RHH5212_R3583
18.9
RHH5240_R3612
30.7
RHH5269_R3641
5.6
Memory CD4 T-cell Th2 nTPM: 19.3
Samples: 4
Max nTPM: 38.5
Min nTPM: 6.8
RHH5305_R3671
15.7
RHH5213_R3584
16.1
RHH5241_R3613
38.5
RHH5270_R3642
6.8
Naive CD4 T-cell nTPM: 19.1
Samples: 4
Max nTPM: 21.2
Min nTPM: 17.0
RHH5306_R3672
21.2
RHH5214_R3585
19.2
RHH5242_R3614
18.8
RHH5271_R3643
17.0
Naive CD8 T-cell nTPM: 12.5
Samples: 4
Max nTPM: 18.5
Min nTPM: 6.7
RHH5201_R3572
18.5
RHH5229_R3601
6.7
RHH5258_R3630
9.8
RHH5287_R3659
14.9
Non-Vd2 gdTCR nTPM: 26.9
Samples: 4
Max nTPM: 31.7
Min nTPM: 15.7
RHH5235_R3607
30.8
RHH5264_R3636
15.7
RHH5207_R3578
31.7
RHH5299_R3665
29.3
T-reg nTPM: 17.0
Samples: 4
Max nTPM: 22.9
Min nTPM: 11.9
RHH5301_R3667
11.9
RHH5237_R3609
22.9
RHH5266_R3638
18.8
RHH5209_R3580
14.4
Terminal effector memory CD4 T-cell nTPM: 19.9
Samples: 2
Max nTPM: 24.4
Min nTPM: 15.3
RHH5243_R3615
15.3
RHH5272_R3644
24.4
Terminal effector memory CD8 T-cell nTPM: 22.5
Samples: 4
Max nTPM: 27.3
Min nTPM: 15.1
RHH5232_R3604
23.4
RHH5204_R3575
15.1
RHH5261_R3633
24.0
RHH5296_R3662
27.3
Vd2 gdTCR nTPM: 19.6
Samples: 4
Max nTPM: 22.5
Min nTPM: 16.2
RHH5234_R3606
22.5
RHH5206_R3577
16.2
RHH5263_R3635
20.7
RHH5298_R3664
19.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
