HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:7.6 nTPM
HPA Brain:57.3 nTPM
GTEx:7.6 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:20.5 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022133Antibody CAB004083Antibody CAB079980
Glial cells HighHighMedium
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.3
Sample id Sample description nTPM
Hippocampus
nTPM: 48.4
2148 Female, age 91, left hemisphere 57.1
1898 Male, age 80, left hemisphere 49.9
2529 Female, age 94, left hemisphere 49.3
1855 Male, age 76, left hemisphere 46.0
2621 Female, age 67, right hemisphere 45.0
1911 Female, age 85, right hemisphere 42.8
Dentate gyrus
nTPM: 49.4
1927 Female, age 91, both hemispheres 57.6
2531 Female, age 67, both hemispheres 54.0
2528 Male, age 74, both hemispheres 51.7
2010 Male, age 76, both hemispheres 51.6
2246 Female, age 85, both hemispheres 46.3
2530 Female, age 94, left hemisphere 35.4
Entorhinal gyrus
nTPM: 50.1
1938 Female, age 85, left hemisphere 54.9
2686 Male, age 75, right hemisphere 53.9
2764 Male, age 80, right hemisphere 53.3
2613 Female, age 94, left hemisphere 47.6
1787 Male, age 76, left hemisphere 46.6
2117 Female, age 91, right hemisphere 44.6
Hippocampus, CA1
nTPM: 54.7
2749 Male, age 80, left hemisphere 67.9
2045 Male, age 76, both hemispheres 60.1
1873 Female, age 85, both hemispheres 51.0
2527 Male, age 74, both hemispheres 48.3
2082 Female, age 91, right hemisphere 46.5
Hippocampus, CA2
nTPM: 48.9
1892 Male, age 76, both hemispheres 55.4
1963 Male, age 80, left hemisphere 53.4
2249 Male, age 74, both hemispheres 51.7
2113 Female, age 91, right hemisphere 47.6
1940 Female, age 85, left hemisphere 43.7
2437 Female, age 94, left hemisphere 41.4
Hippocampus, CA3
nTPM: 54.8
2620 Female, age 94, left hemisphere 64.8
2137 Male, age 80, left hemisphere 57.8
1867 Male, age 76, both hemispheres 56.2
2436 Male, age 74, both hemispheres 55.4
2861 Female, age 67, both hemispheres 48.6
1891 Female, age 85, both hemispheres 45.8
Parahippocampal cortex
nTPM: 50.7
1850 Male, age 80, both hemispheres 58.5
1933 Female, age 85, both hemispheres 56.4
2693 Female, age 94, both hemispheres 53.9
2245 Female, age 91, both hemispheres 52.9
1990 Female, age 91, right hemisphere 52.7
2622 Female, age 67, right hemisphere 51.0
2250 Female, age 67, right hemisphere 47.5
2532 Female, age 72, left hemisphere 45.6
2018 Male, age 76, both hemispheres 44.3
2692 Male, age 74, both hemispheres 44.3
Perirhinal gyrus
nTPM: 57.3
1847 Female, age 91, left hemisphere 63.0
1794 Male, age 80, right hemisphere 59.1
1841 Female, age 85, right hemisphere 56.9
2848 Male, age 76, right hemisphere 56.0
2521 Female, age 94, right hemisphere 51.5
Subiculum
nTPM: 47.2
2438 Female, age 94, left hemisphere 51.7
1901 Male, age 80, both hemispheres 49.9
2729 Female, age 91, right hemisphere 49.4
1977 Female, age 85, both hemispheres 47.7
2619 Male, age 74, both hemispheres 45.4
2042 Male, age 76, both hemispheres 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.6
Samples: 197

Max nTPM: 13.2
Min nTPM: 3.1
Std nTPM: 1.9
Median nTPM: 7.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 13.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 13.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 12.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 11.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 11.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 11.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 11.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 11.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 11.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 11.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.0
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 30.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Subiculum
nTPM: 35.8
Samples: 4

Max nTPM: 44.0
Min nTPM: 32.1
Sample A Female 44.0
Sample B Female 32.1
Sample C Male 34.2
Sample D Male 32.7
Dorsal hippocampus
nTPM: 31.1
Samples: 4

Max nTPM: 33.4
Min nTPM: 28.7
Sample A Female 33.1
Sample B Female 29.0
Sample C Male 33.4
Sample D Male 28.7
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 39.8
Min nTPM: 32.6
Sample A Female 39.8
Sample B Female 32.6
Sample C Male 36.9
Sample D Male 35.2
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 34.5
Min nTPM: 28.3
Sample A Female 33.5
Sample B Female 28.3
Sample C Male 34.5
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.9
Sample A Male 17.9
Sample B Male 19.7
Sample C Female 20.1
Sample D Female 21.9
Hippocampal formation
nTPM: 20.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.3
Sample A Male 20.4
Sample B Male 22.9
Sample C Female 19.3
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
71836834 Antisense, RP_051017_02_B09, Mouse strain C57BL/6J (56 days, male) 12.2
75749423 Antisense, RP_060518_04_E07, Mouse strain C57BL/6J (56 days, male) 7.4
70919454 Antisense, RP_050713_01_D05, Mouse strain C57BL/6J (56 days, male) 0.3
71210190 Antisense, RP_050810_03_F10, Mouse strain C57BL/6J (56 days, male) 0.1

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