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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
532.1
nTPM
Monaco:
1318.7
nTPM
Schmiedel:
751.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
532.1
HPA sample
nTPM
gdT-cell nTPM: 470.1
Samples: 6
Max nTPM: 582.8
Min nTPM: 369.0
P10809_1007
409.7
P10809_1022
582.8
P10809_1041
509.6
P10809_1060
369.0
P10809_1077
491.9
P10809_1098
457.5
MAIT T-cell nTPM: 412.0
Samples: 6
Max nTPM: 467.0
Min nTPM: 374.5
P10809_1006
376.7
P10809_1024
455.2
P10809_1043
409.1
P10809_1062
374.5
P10809_1083
389.2
P10809_1097
467.0
Memory CD4 T-cell nTPM: 402.0
Samples: 6
Max nTPM: 455.6
Min nTPM: 359.7
P10809_1014
359.7
P10809_1026
374.8
P10809_1045
455.6
P10809_1064
398.2
P10809_1086
416.9
P10809_1113
406.8
Memory CD8 T-cell nTPM: 467.9
Samples: 5
Max nTPM: 516.6
Min nTPM: 403.4
P10809_1012
403.4
P10809_1027
500.9
P10809_1046
516.6
P10809_1065
442.7
P10809_1111
475.7
Naive CD4 T-cell nTPM: 303.4
Samples: 6
Max nTPM: 345.6
Min nTPM: 255.6
P10809_1015
319.1
P10809_1030
293.0
P10809_1049
255.6
P10809_1068
293.1
P10809_1085
345.6
P10809_1112
313.9
Naive CD8 T-cell nTPM: 385.0
Samples: 6
Max nTPM: 472.9
Min nTPM: 302.8
P10809_1016
302.8
P10809_1031
405.9
P10809_1050
390.9
P10809_1069
407.8
P10809_1087
472.9
P10809_1110
329.8
T-reg nTPM: 532.1
Samples: 6
Max nTPM: 565.3
Min nTPM: 482.9
P10809_1018
482.9
P10809_1037
533.4
P10809_1056
510.2
P10809_1075
536.1
P10809_1094
565.3
P10809_1106
564.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1318.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 832.6
Samples: 4
Max nTPM: 964.3
Min nTPM: 578.8
RHH5202_R3573
964.3
RHH5230_R3602
913.8
RHH5259_R3631
578.8
RHH5288_R3660
873.4
Effector memory CD8 T-cell nTPM: 1267.0
Samples: 4
Max nTPM: 1436.3
Min nTPM: 990.2
RHH5203_R3574
1436.3
RHH5231_R3603
1267.6
RHH5260_R3632
990.2
RHH5289_R3661
1373.7
MAIT T-cell nTPM: 1023.8
Samples: 4
Max nTPM: 1087.3
Min nTPM: 960.3
RHH5233_R3605
1036.2
RHH5205_R3576
1087.3
RHH5262_R3634
1011.4
RHH5297_R3663
960.3
Memory CD4 T-cell TFH nTPM: 788.6
Samples: 4
Max nTPM: 957.3
Min nTPM: 673.1
RHH5300_R3666
735.0
RHH5236_R3608
673.1
RHH5265_R3637
788.8
RHH5208_R3579
957.3
Memory CD4 T-cell Th1 nTPM: 785.2
Samples: 4
Max nTPM: 880.5
Min nTPM: 664.2
RHH5210_R3581
805.5
RHH5302_R3668
880.5
RHH5238_R3610
664.2
RHH5267_R3639
790.6
Memory CD4 T-cell Th1/Th17 nTPM: 852.1
Samples: 4
Max nTPM: 1028.7
Min nTPM: 671.8
RHH5303_R3669
952.1
RHH5211_R3582
1028.7
RHH5239_R3611
671.8
RHH5268_R3640
755.8
Memory CD4 T-cell Th17 nTPM: 987.0
Samples: 4
Max nTPM: 1071.2
Min nTPM: 823.2
RHH5304_R3670
1027.4
RHH5212_R3583
1026.2
RHH5240_R3612
1071.2
RHH5269_R3641
823.2
Memory CD4 T-cell Th2 nTPM: 1005.8
Samples: 4
Max nTPM: 1047.5
Min nTPM: 981.3
RHH5305_R3671
997.0
RHH5213_R3584
997.4
RHH5241_R3613
1047.5
RHH5270_R3642
981.3
Naive CD4 T-cell nTPM: 703.9
Samples: 4
Max nTPM: 790.8
Min nTPM: 624.8
RHH5306_R3672
790.8
RHH5214_R3585
624.8
RHH5242_R3614
672.4
RHH5271_R3643
727.7
Naive CD8 T-cell nTPM: 658.1
Samples: 4
Max nTPM: 859.7
Min nTPM: 455.4
RHH5201_R3572
859.7
RHH5229_R3601
455.4
RHH5258_R3630
669.8
RHH5287_R3659
647.6
Non-Vd2 gdTCR nTPM: 1318.7
Samples: 4
Max nTPM: 1549.8
Min nTPM: 1149.4
RHH5235_R3607
1305.2
RHH5264_R3636
1270.5
RHH5207_R3578
1549.8
RHH5299_R3665
1149.4
T-reg nTPM: 773.1
Samples: 4
Max nTPM: 813.3
Min nTPM: 732.8
RHH5301_R3667
772.9
RHH5237_R3609
813.3
RHH5266_R3638
773.2
RHH5209_R3580
732.8
Terminal effector memory CD4 T-cell nTPM: 1151.4
Samples: 2
Max nTPM: 1201.6
Min nTPM: 1101.2
RHH5243_R3615
1201.6
RHH5272_R3644
1101.2
Terminal effector memory CD8 T-cell nTPM: 1252.7
Samples: 4
Max nTPM: 1381.0
Min nTPM: 1139.3
RHH5232_R3604
1321.1
RHH5204_R3575
1139.3
RHH5261_R3633
1169.4
RHH5296_R3662
1381.0
Vd2 gdTCR nTPM: 1041.4
Samples: 4
Max nTPM: 1263.7
Min nTPM: 855.7
RHH5234_R3606
1095.3
RHH5206_R3577
1263.7
RHH5263_R3635
950.9
RHH5298_R3664
855.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.