HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:51.5 nTPM
HPA Brain:117.2 nTPM
GTEx:51.5 nTPM
FANTOM5:112.5 Scaled Tags Per Million
Pig:127.9 nTPM
Mouse:120.7 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021851
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.2
Sample id Sample description nTPM
Hippocampus
nTPM: 94.7
2148 Female, age 91, left hemisphere 112.7
1898 Male, age 80, left hemisphere 111.1
2621 Female, age 67, right hemisphere 109.6
1911 Female, age 85, right hemisphere 84.9
1855 Male, age 76, left hemisphere 80.9
2529 Female, age 94, left hemisphere 69.0
Dentate gyrus
nTPM: 103.7
1927 Female, age 91, both hemispheres 130.0
2531 Female, age 67, both hemispheres 124.2
2530 Female, age 94, left hemisphere 106.7
2246 Female, age 85, both hemispheres 93.1
2010 Male, age 76, both hemispheres 87.4
2528 Male, age 74, both hemispheres 80.9
Entorhinal gyrus
nTPM: 117.0
2613 Female, age 94, left hemisphere 158.5
2764 Male, age 80, right hemisphere 128.6
2686 Male, age 75, right hemisphere 123.2
1938 Female, age 85, left hemisphere 116.5
1787 Male, age 76, left hemisphere 101.3
2117 Female, age 91, right hemisphere 73.9
Hippocampus, CA1
nTPM: 108.9
2749 Male, age 80, left hemisphere 170.4
1873 Female, age 85, both hemispheres 106.8
2045 Male, age 76, both hemispheres 92.8
2527 Male, age 74, both hemispheres 89.5
2082 Female, age 91, right hemisphere 84.8
Hippocampus, CA2
nTPM: 106.6
1963 Male, age 80, left hemisphere 136.7
1892 Male, age 76, both hemispheres 122.0
2437 Female, age 94, left hemisphere 115.4
1940 Female, age 85, left hemisphere 98.6
2249 Male, age 74, both hemispheres 83.5
2113 Female, age 91, right hemisphere 83.3
Hippocampus, CA3
nTPM: 117.2
2620 Female, age 94, left hemisphere 165.1
2137 Male, age 80, left hemisphere 138.3
2861 Female, age 67, both hemispheres 118.8
1867 Male, age 76, both hemispheres 108.3
1891 Female, age 85, both hemispheres 90.6
2436 Male, age 74, both hemispheres 82.2
Parahippocampal cortex
nTPM: 105.3
2693 Female, age 94, both hemispheres 121.6
1850 Male, age 80, both hemispheres 116.9
2622 Female, age 67, right hemisphere 112.5
2532 Female, age 72, left hemisphere 109.1
2245 Female, age 91, both hemispheres 107.9
1990 Female, age 91, right hemisphere 107.3
1933 Female, age 85, both hemispheres 107.1
2692 Male, age 74, both hemispheres 99.8
2250 Female, age 67, right hemisphere 87.3
2018 Male, age 76, both hemispheres 83.8
Perirhinal gyrus
nTPM: 116.7
1847 Female, age 91, left hemisphere 136.2
1794 Male, age 80, right hemisphere 128.4
2521 Female, age 94, right hemisphere 116.8
1841 Female, age 85, right hemisphere 106.3
2848 Male, age 76, right hemisphere 95.9
Subiculum
nTPM: 94.2
2438 Female, age 94, left hemisphere 111.1
1901 Male, age 80, both hemispheres 107.1
1977 Female, age 85, both hemispheres 102.7
2619 Male, age 74, both hemispheres 88.1
2729 Female, age 91, right hemisphere 78.7
2042 Male, age 76, both hemispheres 77.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.5
Samples: 197

Max nTPM: 142.7
Min nTPM: 11.5
Std nTPM: 28.1
Median nTPM: 43.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 142.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 132.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 125.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 125.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 122.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 122.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 114.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 113.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 112.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 111.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 111.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.5
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 91.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 127.9
Pig sample Sample description nTPM
Subiculum
nTPM: 91.8
Samples: 4

Max nTPM: 130.2
Min nTPM: 74.4
Sample A Female 130.2
Sample B Female 85.5
Sample C Male 77.2
Sample D Male 74.4
Dorsal hippocampus
nTPM: 97.0
Samples: 4

Max nTPM: 125.8
Min nTPM: 65.8
Sample A Female 125.8
Sample B Female 93.6
Sample C Male 102.6
Sample D Male 65.8
Entorhinal cortex
nTPM: 128.0
Samples: 4

Max nTPM: 148.6
Min nTPM: 102.6
Sample A Female 122.2
Sample B Female 148.6
Sample C Male 138.4
Sample D Male 102.6
Ventral hippocampus
nTPM: 85.2
Samples: 4

Max nTPM: 101.6
Min nTPM: 66.3
Sample A Female 84.9
Sample B Female 66.3
Sample C Male 101.6
Sample D Male 88.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.7
Samples: 4

Max nTPM: 123.7
Min nTPM: 113.8
Sample A Male 121.9
Sample B Male 123.4
Sample C Female 113.8
Sample D Female 123.7
Hippocampal formation
nTPM: 99.0
Samples: 4

Max nTPM: 106.9
Min nTPM: 95.5
Sample A Male 106.9
Sample B Male 95.5
Sample C Female 96.0
Sample D Female 97.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
841 Antisense, RP_Baylor_102965, Mouse strain C57BL/6J (56 days, male) 4.6
842 Antisense, RP_Baylor_102965, Mouse strain C57BL/6J (56 days, male) 0.5
843 Sense, RPS_Baylor_37023, Mouse strain C57BL/6J (56 days, male) 0.0

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