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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.8
nTPM
Monaco:
115.7
nTPM
Schmiedel:
121.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.8
HPA sample
nTPM
gdT-cell nTPM: 23.0
Samples: 6
Max nTPM: 28.7
Min nTPM: 19.3
P10809_1007
20.1
P10809_1022
28.7
P10809_1041
23.9
P10809_1060
22.5
P10809_1077
19.3
P10809_1098
23.6
MAIT T-cell nTPM: 30.8
Samples: 6
Max nTPM: 35.4
Min nTPM: 22.8
P10809_1006
31.9
P10809_1024
29.4
P10809_1043
22.8
P10809_1062
33.8
P10809_1083
35.4
P10809_1097
31.6
Memory CD4 T-cell nTPM: 24.9
Samples: 6
Max nTPM: 30.5
Min nTPM: 19.2
P10809_1014
25.9
P10809_1026
19.2
P10809_1045
27.0
P10809_1064
21.3
P10809_1086
25.6
P10809_1113
30.5
Memory CD8 T-cell nTPM: 30.3
Samples: 5
Max nTPM: 35.5
Min nTPM: 26.3
P10809_1012
30.4
P10809_1027
26.3
P10809_1046
31.1
P10809_1065
28.1
P10809_1111
35.5
Naive CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 32.2
Min nTPM: 17.3
P10809_1015
30.6
P10809_1030
32.2
P10809_1049
27.4
P10809_1068
30.0
P10809_1085
17.3
P10809_1112
29.7
Naive CD8 T-cell nTPM: 25.7
Samples: 6
Max nTPM: 33.5
Min nTPM: 19.1
P10809_1016
25.1
P10809_1031
19.1
P10809_1050
25.2
P10809_1069
33.5
P10809_1087
26.5
P10809_1110
24.7
T-reg nTPM: 30.0
Samples: 6
Max nTPM: 38.7
Min nTPM: 23.6
P10809_1018
26.7
P10809_1037
27.1
P10809_1056
38.7
P10809_1075
32.7
P10809_1094
31.4
P10809_1106
23.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.9
Samples: 4
Max nTPM: 124.1
Min nTPM: 94.9
RHH5202_R3573
94.9
RHH5230_R3602
100.5
RHH5259_R3631
124.1
RHH5288_R3660
100.1
Effector memory CD8 T-cell nTPM: 93.9
Samples: 4
Max nTPM: 106.6
Min nTPM: 71.1
RHH5203_R3574
104.8
RHH5231_R3603
71.1
RHH5260_R3632
106.6
RHH5289_R3661
93.1
MAIT T-cell nTPM: 96.3
Samples: 4
Max nTPM: 112.4
Min nTPM: 87.6
RHH5233_R3605
87.6
RHH5205_R3576
112.4
RHH5262_R3634
90.0
RHH5297_R3663
95.3
Memory CD4 T-cell TFH nTPM: 97.6
Samples: 4
Max nTPM: 120.8
Min nTPM: 77.7
RHH5300_R3666
89.9
RHH5236_R3608
77.7
RHH5265_R3637
120.8
RHH5208_R3579
102.0
Memory CD4 T-cell Th1 nTPM: 102.5
Samples: 4
Max nTPM: 110.7
Min nTPM: 95.0
RHH5210_R3581
98.9
RHH5302_R3668
95.0
RHH5238_R3610
110.7
RHH5267_R3639
105.5
Memory CD4 T-cell Th1/Th17 nTPM: 112.3
Samples: 4
Max nTPM: 137.6
Min nTPM: 88.7
RHH5303_R3669
110.5
RHH5211_R3582
112.2
RHH5239_R3611
137.6
RHH5268_R3640
88.7
Memory CD4 T-cell Th17 nTPM: 115.7
Samples: 4
Max nTPM: 136.9
Min nTPM: 100.9
RHH5304_R3670
107.3
RHH5212_R3583
117.8
RHH5240_R3612
136.9
RHH5269_R3641
100.9
Memory CD4 T-cell Th2 nTPM: 98.6
Samples: 4
Max nTPM: 115.3
Min nTPM: 82.3
RHH5305_R3671
93.4
RHH5213_R3584
115.3
RHH5241_R3613
103.5
RHH5270_R3642
82.3
Naive CD4 T-cell nTPM: 99.3
Samples: 4
Max nTPM: 118.0
Min nTPM: 84.9
RHH5306_R3672
100.0
RHH5214_R3585
94.2
RHH5242_R3614
84.9
RHH5271_R3643
118.0
Naive CD8 T-cell nTPM: 84.6
Samples: 4
Max nTPM: 110.4
Min nTPM: 56.1
RHH5201_R3572
56.1
RHH5229_R3601
110.4
RHH5258_R3630
78.1
RHH5287_R3659
93.8
Non-Vd2 gdTCR nTPM: 89.7
Samples: 4
Max nTPM: 102.4
Min nTPM: 72.8
RHH5235_R3607
86.0
RHH5264_R3636
72.8
RHH5207_R3578
102.4
RHH5299_R3665
97.6
T-reg nTPM: 95.9
Samples: 4
Max nTPM: 107.6
Min nTPM: 77.5
RHH5301_R3667
77.5
RHH5237_R3609
107.6
RHH5266_R3638
102.4
RHH5209_R3580
96.2
Terminal effector memory CD4 T-cell nTPM: 94.0
Samples: 2
Max nTPM: 106.0
Min nTPM: 82.0
RHH5243_R3615
106.0
RHH5272_R3644
82.0
Terminal effector memory CD8 T-cell nTPM: 97.9
Samples: 4
Max nTPM: 107.2
Min nTPM: 80.1
RHH5232_R3604
107.2
RHH5204_R3575
80.1
RHH5261_R3633
107.2
RHH5296_R3662
97.0
Vd2 gdTCR nTPM: 89.1
Samples: 4
Max nTPM: 101.3
Min nTPM: 72.2
RHH5234_R3606
93.8
RHH5206_R3577
89.1
RHH5263_R3635
101.3
RHH5298_R3664
72.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
