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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.3
nTPM
Monaco:
154.1
nTPM
Schmiedel:
97.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.3
HPA sample
nTPM
gdT-cell nTPM: 71.8
Samples: 6
Max nTPM: 92.4
Min nTPM: 64.0
P10809_1007
66.4
P10809_1022
92.4
P10809_1041
75.1
P10809_1060
64.0
P10809_1077
66.7
P10809_1098
66.2
MAIT T-cell nTPM: 67.9
Samples: 6
Max nTPM: 81.8
Min nTPM: 54.1
P10809_1006
54.1
P10809_1024
81.8
P10809_1043
75.7
P10809_1062
70.6
P10809_1083
57.4
P10809_1097
67.9
Memory CD4 T-cell nTPM: 73.3
Samples: 6
Max nTPM: 105.5
Min nTPM: 59.2
P10809_1014
69.4
P10809_1026
105.5
P10809_1045
69.7
P10809_1064
66.6
P10809_1086
59.2
P10809_1113
69.3
Memory CD8 T-cell nTPM: 71.0
Samples: 5
Max nTPM: 76.7
Min nTPM: 65.6
P10809_1012
68.7
P10809_1027
68.8
P10809_1046
76.7
P10809_1065
75.0
P10809_1111
65.6
Naive CD4 T-cell nTPM: 57.9
Samples: 6
Max nTPM: 76.7
Min nTPM: 49.0
P10809_1015
54.2
P10809_1030
49.0
P10809_1049
76.7
P10809_1068
56.0
P10809_1085
49.6
P10809_1112
61.8
Naive CD8 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 82.9
Min nTPM: 40.7
P10809_1016
56.9
P10809_1031
82.9
P10809_1050
65.4
P10809_1069
79.8
P10809_1087
56.2
P10809_1110
40.7
T-reg nTPM: 107.3
Samples: 6
Max nTPM: 130.4
Min nTPM: 85.8
P10809_1018
101.2
P10809_1037
104.7
P10809_1056
130.4
P10809_1075
85.8
P10809_1094
120.0
P10809_1106
101.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.4
Samples: 4
Max nTPM: 131.9
Min nTPM: 93.1
RHH5202_R3573
126.2
RHH5230_R3602
98.4
RHH5259_R3631
93.1
RHH5288_R3660
131.9
Effector memory CD8 T-cell nTPM: 152.1
Samples: 4
Max nTPM: 181.5
Min nTPM: 112.9
RHH5203_R3574
181.5
RHH5231_R3603
140.1
RHH5260_R3632
112.9
RHH5289_R3661
173.7
MAIT T-cell nTPM: 129.6
Samples: 4
Max nTPM: 157.7
Min nTPM: 82.4
RHH5233_R3605
144.9
RHH5205_R3576
82.4
RHH5262_R3634
133.4
RHH5297_R3663
157.7
Memory CD4 T-cell TFH nTPM: 148.2
Samples: 4
Max nTPM: 180.9
Min nTPM: 126.2
RHH5300_R3666
127.0
RHH5236_R3608
158.7
RHH5265_R3637
126.2
RHH5208_R3579
180.9
Memory CD4 T-cell Th1 nTPM: 135.7
Samples: 4
Max nTPM: 196.8
Min nTPM: 86.1
RHH5210_R3581
151.2
RHH5302_R3668
196.8
RHH5238_R3610
86.1
RHH5267_R3639
108.8
Memory CD4 T-cell Th1/Th17 nTPM: 137.0
Samples: 4
Max nTPM: 192.9
Min nTPM: 71.4
RHH5303_R3669
192.9
RHH5211_R3582
183.5
RHH5239_R3611
71.4
RHH5268_R3640
100.3
Memory CD4 T-cell Th17 nTPM: 113.8
Samples: 4
Max nTPM: 168.1
Min nTPM: 83.4
RHH5304_R3670
111.4
RHH5212_R3583
168.1
RHH5240_R3612
92.1
RHH5269_R3641
83.4
Memory CD4 T-cell Th2 nTPM: 135.1
Samples: 4
Max nTPM: 155.4
Min nTPM: 115.5
RHH5305_R3671
147.6
RHH5213_R3584
155.4
RHH5241_R3613
115.5
RHH5270_R3642
121.8
Naive CD4 T-cell nTPM: 124.2
Samples: 4
Max nTPM: 150.0
Min nTPM: 83.7
RHH5306_R3672
149.9
RHH5214_R3585
150.0
RHH5242_R3614
83.7
RHH5271_R3643
113.2
Naive CD8 T-cell nTPM: 116.2
Samples: 4
Max nTPM: 160.5
Min nTPM: 58.9
RHH5201_R3572
160.5
RHH5229_R3601
58.9
RHH5258_R3630
131.0
RHH5287_R3659
114.3
Non-Vd2 gdTCR nTPM: 150.4
Samples: 4
Max nTPM: 184.3
Min nTPM: 89.3
RHH5235_R3607
89.3
RHH5264_R3636
164.2
RHH5207_R3578
163.9
RHH5299_R3665
184.3
T-reg nTPM: 126.2
Samples: 4
Max nTPM: 158.0
Min nTPM: 99.9
RHH5301_R3667
142.0
RHH5237_R3609
158.0
RHH5266_R3638
105.0
RHH5209_R3580
99.9
Terminal effector memory CD4 T-cell nTPM: 106.0
Samples: 2
Max nTPM: 126.0
Min nTPM: 85.9
RHH5243_R3615
85.9
RHH5272_R3644
126.0
Terminal effector memory CD8 T-cell nTPM: 154.1
Samples: 4
Max nTPM: 204.7
Min nTPM: 103.8
RHH5232_R3604
157.8
RHH5204_R3575
150.1
RHH5261_R3633
103.8
RHH5296_R3662
204.7
Vd2 gdTCR nTPM: 151.4
Samples: 4
Max nTPM: 178.2
Min nTPM: 128.0
RHH5234_R3606
130.5
RHH5206_R3577
169.0
RHH5263_R3635
128.0
RHH5298_R3664
178.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
