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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.0
nTPM
Monaco:
76.9
nTPM
Schmiedel:
59.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.0
HPA sample
nTPM
gdT-cell nTPM: 44.4
Samples: 6
Max nTPM: 51.9
Min nTPM: 35.4
P10809_1007
49.1
P10809_1022
46.6
P10809_1041
46.2
P10809_1060
35.4
P10809_1077
37.2
P10809_1098
51.9
MAIT T-cell nTPM: 40.5
Samples: 6
Max nTPM: 49.0
Min nTPM: 29.9
P10809_1006
43.1
P10809_1024
29.9
P10809_1043
49.0
P10809_1062
37.9
P10809_1083
43.5
P10809_1097
39.3
Memory CD4 T-cell nTPM: 34.1
Samples: 6
Max nTPM: 40.9
Min nTPM: 27.3
P10809_1014
35.7
P10809_1026
32.1
P10809_1045
27.3
P10809_1064
29.3
P10809_1086
40.9
P10809_1113
39.1
Memory CD8 T-cell nTPM: 41.7
Samples: 5
Max nTPM: 47.9
Min nTPM: 36.4
P10809_1012
37.8
P10809_1027
44.3
P10809_1046
47.9
P10809_1065
42.3
P10809_1111
36.4
Naive CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 34.3
Min nTPM: 23.6
P10809_1015
27.6
P10809_1030
27.0
P10809_1049
24.3
P10809_1068
24.6
P10809_1085
34.3
P10809_1112
23.6
Naive CD8 T-cell nTPM: 33.7
Samples: 6
Max nTPM: 38.5
Min nTPM: 28.0
P10809_1016
28.0
P10809_1031
36.6
P10809_1050
32.7
P10809_1069
31.5
P10809_1087
38.5
P10809_1110
34.8
T-reg nTPM: 52.0
Samples: 6
Max nTPM: 55.1
Min nTPM: 45.9
P10809_1018
51.9
P10809_1037
55.0
P10809_1056
45.9
P10809_1075
53.8
P10809_1094
50.3
P10809_1106
55.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 45.9
Samples: 4
Max nTPM: 67.0
Min nTPM: 23.4
RHH5202_R3573
66.8
RHH5230_R3602
23.4
RHH5259_R3631
26.3
RHH5288_R3660
67.0
Effector memory CD8 T-cell nTPM: 61.3
Samples: 4
Max nTPM: 99.5
Min nTPM: 31.4
RHH5203_R3574
99.5
RHH5231_R3603
59.3
RHH5260_R3632
31.4
RHH5289_R3661
55.1
MAIT T-cell nTPM: 58.5
Samples: 4
Max nTPM: 64.6
Min nTPM: 53.2
RHH5233_R3605
59.0
RHH5205_R3576
53.2
RHH5262_R3634
57.3
RHH5297_R3663
64.6
Memory CD4 T-cell TFH nTPM: 57.6
Samples: 4
Max nTPM: 99.0
Min nTPM: 33.1
RHH5300_R3666
54.0
RHH5236_R3608
33.1
RHH5265_R3637
44.1
RHH5208_R3579
99.0
Memory CD4 T-cell Th1 nTPM: 50.9
Samples: 4
Max nTPM: 83.5
Min nTPM: 27.2
RHH5210_R3581
83.5
RHH5302_R3668
60.0
RHH5238_R3610
27.2
RHH5267_R3639
33.0
Memory CD4 T-cell Th1/Th17 nTPM: 64.2
Samples: 4
Max nTPM: 117.0
Min nTPM: 17.9
RHH5303_R3669
81.6
RHH5211_R3582
117.0
RHH5239_R3611
17.9
RHH5268_R3640
40.1
Memory CD4 T-cell Th17 nTPM: 42.7
Samples: 4
Max nTPM: 88.8
Min nTPM: 22.4
RHH5304_R3670
34.3
RHH5212_R3583
88.8
RHH5240_R3612
22.4
RHH5269_R3641
25.3
Memory CD4 T-cell Th2 nTPM: 56.5
Samples: 4
Max nTPM: 81.7
Min nTPM: 37.1
RHH5305_R3671
60.9
RHH5213_R3584
81.7
RHH5241_R3613
46.3
RHH5270_R3642
37.1
Naive CD4 T-cell nTPM: 38.6
Samples: 4
Max nTPM: 62.5
Min nTPM: 27.6
RHH5306_R3672
36.3
RHH5214_R3585
62.5
RHH5242_R3614
27.6
RHH5271_R3643
28.1
Naive CD8 T-cell nTPM: 33.2
Samples: 4
Max nTPM: 49.7
Min nTPM: 11.8
RHH5201_R3572
49.7
RHH5229_R3601
11.8
RHH5258_R3630
38.9
RHH5287_R3659
32.2
Non-Vd2 gdTCR nTPM: 66.7
Samples: 4
Max nTPM: 87.3
Min nTPM: 24.9
RHH5235_R3607
24.9
RHH5264_R3636
74.1
RHH5207_R3578
87.3
RHH5299_R3665
80.3
T-reg nTPM: 44.4
Samples: 4
Max nTPM: 57.7
Min nTPM: 27.7
RHH5301_R3667
57.7
RHH5237_R3609
45.5
RHH5266_R3638
27.7
RHH5209_R3580
46.6
Terminal effector memory CD4 T-cell nTPM: 39.0
Samples: 2
Max nTPM: 46.9
Min nTPM: 31.0
RHH5243_R3615
31.0
RHH5272_R3644
46.9
Terminal effector memory CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 88.2
Min nTPM: 37.1
RHH5232_R3604
45.2
RHH5204_R3575
88.2
RHH5261_R3633
37.1
RHH5296_R3662
77.9
Vd2 gdTCR nTPM: 77.0
Samples: 4
Max nTPM: 134.6
Min nTPM: 34.5
RHH5234_R3606
54.7
RHH5206_R3577
134.6
RHH5263_R3635
34.5
RHH5298_R3664
84.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
