HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:75.0 nTPM
HPA Brain:74.2 nTPM
GTEx:75.0 nTPM
FANTOM5:117.0 Scaled Tags Per Million
Pig:135.7 nTPM
Mouse:299.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031402Antibody HPA031404
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.2
Sample id Sample description nTPM
Hippocampus
nTPM: 74.2
1898 Male, age 80, left hemisphere 89.4
1855 Male, age 76, left hemisphere 75.6
2529 Female, age 94, left hemisphere 75.1
1911 Female, age 85, right hemisphere 70.8
2148 Female, age 91, left hemisphere 68.0
2621 Female, age 67, right hemisphere 66.0
Dentate gyrus
nTPM: 65.7
2010 Male, age 76, both hemispheres 74.0
2528 Male, age 74, both hemispheres 74.0
2246 Female, age 85, both hemispheres 69.0
1927 Female, age 91, both hemispheres 67.8
2530 Female, age 94, left hemisphere 66.0
2531 Female, age 67, both hemispheres 43.6
Entorhinal gyrus
nTPM: 61.0
2117 Female, age 91, right hemisphere 82.9
1938 Female, age 85, left hemisphere 74.8
1787 Male, age 76, left hemisphere 64.8
2764 Male, age 80, right hemisphere 50.5
2686 Male, age 75, right hemisphere 49.0
2613 Female, age 94, left hemisphere 44.2
Hippocampus, CA1
nTPM: 73.0
2527 Male, age 74, both hemispheres 81.0
1873 Female, age 85, both hemispheres 74.8
2082 Female, age 91, right hemisphere 74.4
2749 Male, age 80, left hemisphere 71.5
2045 Male, age 76, both hemispheres 63.5
Hippocampus, CA2
nTPM: 72.4
2249 Male, age 74, both hemispheres 103.6
2113 Female, age 91, right hemisphere 71.8
1940 Female, age 85, left hemisphere 71.2
1963 Male, age 80, left hemisphere 65.4
1892 Male, age 76, both hemispheres 64.4
2437 Female, age 94, left hemisphere 58.0
Hippocampus, CA3
nTPM: 70.7
2436 Male, age 74, both hemispheres 103.4
1891 Female, age 85, both hemispheres 72.9
1867 Male, age 76, both hemispheres 71.1
2137 Male, age 80, left hemisphere 68.7
2620 Female, age 94, left hemisphere 55.0
2861 Female, age 67, both hemispheres 52.9
Parahippocampal cortex
nTPM: 64.0
2250 Female, age 67, right hemisphere 81.2
2018 Male, age 76, both hemispheres 73.7
1933 Female, age 85, both hemispheres 72.6
1850 Male, age 80, both hemispheres 67.6
1990 Female, age 91, right hemisphere 67.3
2245 Female, age 91, both hemispheres 60.8
2693 Female, age 94, both hemispheres 60.8
2692 Male, age 74, both hemispheres 58.2
2622 Female, age 67, right hemisphere 50.4
2532 Female, age 72, left hemisphere 47.6
Perirhinal gyrus
nTPM: 63.0
1847 Female, age 91, left hemisphere 72.9
1841 Female, age 85, right hemisphere 67.7
1794 Male, age 80, right hemisphere 64.8
2521 Female, age 94, right hemisphere 57.9
2848 Male, age 76, right hemisphere 51.6
Subiculum
nTPM: 69.4
2729 Female, age 91, right hemisphere 80.4
2619 Male, age 74, both hemispheres 73.2
2042 Male, age 76, both hemispheres 72.0
1901 Male, age 80, both hemispheres 69.0
1977 Female, age 85, both hemispheres 67.0
2438 Female, age 94, left hemisphere 54.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.0
Samples: 197

Max nTPM: 138.4
Min nTPM: 35.3
Std nTPM: 17.2
Median nTPM: 73.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 138.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 135.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 125.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 121.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 120.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 119.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 119.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 109.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 107.9
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 104.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 104.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.0
FF:10153-102I9 76 years, female 122.9
FF:10169-103B7 60 years, female 111.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 135.7
Pig sample Sample description nTPM
Subiculum
nTPM: 115.4
Samples: 4

Max nTPM: 131.5
Min nTPM: 97.6
Sample A Female 131.5
Sample B Female 97.6
Sample C Male 110.0
Sample D Male 122.4
Dorsal hippocampus
nTPM: 135.8
Samples: 4

Max nTPM: 161.5
Min nTPM: 111.8
Sample A Female 161.5
Sample B Female 134.1
Sample C Male 135.6
Sample D Male 111.8
Entorhinal cortex
nTPM: 111.5
Samples: 4

Max nTPM: 136.5
Min nTPM: 83.2
Sample A Female 136.5
Sample B Female 109.1
Sample C Male 117.1
Sample D Male 83.2
Ventral hippocampus
nTPM: 123.8
Samples: 4

Max nTPM: 137.6
Min nTPM: 94.9
Sample A Female 134.8
Sample B Female 94.9
Sample C Male 137.6
Sample D Male 127.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 299.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 258.5
Samples: 4

Max nTPM: 279.3
Min nTPM: 246.6
Sample A Male 254.2
Sample B Male 254.0
Sample C Female 279.3
Sample D Female 246.6
Hippocampal formation
nTPM: 299.1
Samples: 4

Max nTPM: 312.1
Min nTPM: 282.8
Sample A Male 305.2
Sample B Male 282.8
Sample C Female 296.4
Sample D Female 312.1

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