We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
127.1
nTPM
Monaco:
199.6
nTPM
Schmiedel:
129.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.1
HPA sample
nTPM
gdT-cell nTPM: 94.8
Samples: 6
Max nTPM: 114.2
Min nTPM: 73.1
P10809_1007
73.1
P10809_1022
114.2
P10809_1041
74.0
P10809_1060
96.9
P10809_1077
99.0
P10809_1098
111.6
MAIT T-cell nTPM: 116.6
Samples: 6
Max nTPM: 153.4
Min nTPM: 75.3
P10809_1006
75.3
P10809_1024
153.4
P10809_1043
97.6
P10809_1062
116.5
P10809_1083
114.9
P10809_1097
142.1
Memory CD4 T-cell nTPM: 113.3
Samples: 6
Max nTPM: 139.8
Min nTPM: 85.4
P10809_1014
85.4
P10809_1026
115.9
P10809_1045
111.6
P10809_1064
112.7
P10809_1086
139.8
P10809_1113
114.3
Memory CD8 T-cell nTPM: 106.9
Samples: 5
Max nTPM: 130.8
Min nTPM: 71.3
P10809_1012
71.3
P10809_1027
113.7
P10809_1046
94.8
P10809_1065
130.8
P10809_1111
123.8
Naive CD4 T-cell nTPM: 127.1
Samples: 6
Max nTPM: 144.3
Min nTPM: 100.3
P10809_1015
100.3
P10809_1030
137.3
P10809_1049
121.0
P10809_1068
144.3
P10809_1085
139.4
P10809_1112
120.3
Naive CD8 T-cell nTPM: 114.0
Samples: 6
Max nTPM: 147.5
Min nTPM: 86.6
P10809_1016
86.6
P10809_1031
99.2
P10809_1050
109.9
P10809_1069
147.5
P10809_1087
143.3
P10809_1110
97.5
T-reg nTPM: 119.6
Samples: 6
Max nTPM: 131.8
Min nTPM: 79.2
P10809_1018
79.2
P10809_1037
131.8
P10809_1056
130.4
P10809_1075
122.0
P10809_1094
122.6
P10809_1106
131.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 136.6
Samples: 4
Max nTPM: 170.7
Min nTPM: 110.1
RHH5202_R3573
170.7
RHH5230_R3602
134.7
RHH5259_R3631
110.1
RHH5288_R3660
130.8
Effector memory CD8 T-cell nTPM: 176.1
Samples: 4
Max nTPM: 214.2
Min nTPM: 100.8
RHH5203_R3574
207.4
RHH5231_R3603
214.2
RHH5260_R3632
100.8
RHH5289_R3661
181.9
MAIT T-cell nTPM: 158.0
Samples: 4
Max nTPM: 179.7
Min nTPM: 138.3
RHH5233_R3605
179.7
RHH5205_R3576
138.3
RHH5262_R3634
163.8
RHH5297_R3663
150.3
Memory CD4 T-cell TFH nTPM: 170.8
Samples: 4
Max nTPM: 216.9
Min nTPM: 127.5
RHH5300_R3666
127.5
RHH5236_R3608
216.9
RHH5265_R3637
178.0
RHH5208_R3579
160.8
Memory CD4 T-cell Th1 nTPM: 129.7
Samples: 4
Max nTPM: 152.4
Min nTPM: 112.1
RHH5210_R3581
123.5
RHH5302_R3668
152.4
RHH5238_R3610
112.1
RHH5267_R3639
130.7
Memory CD4 T-cell Th1/Th17 nTPM: 147.0
Samples: 4
Max nTPM: 211.7
Min nTPM: 59.6
RHH5303_R3669
192.9
RHH5211_R3582
211.7
RHH5239_R3611
59.6
RHH5268_R3640
123.9
Memory CD4 T-cell Th17 nTPM: 118.2
Samples: 4
Max nTPM: 144.9
Min nTPM: 100.0
RHH5304_R3670
119.0
RHH5212_R3583
144.9
RHH5240_R3612
108.7
RHH5269_R3641
100.0
Memory CD4 T-cell Th2 nTPM: 162.9
Samples: 4
Max nTPM: 187.0
Min nTPM: 134.3
RHH5305_R3671
153.4
RHH5213_R3584
176.7
RHH5241_R3613
187.0
RHH5270_R3642
134.3
Naive CD4 T-cell nTPM: 131.2
Samples: 4
Max nTPM: 145.9
Min nTPM: 116.5
RHH5306_R3672
116.5
RHH5214_R3585
134.1
RHH5242_R3614
145.9
RHH5271_R3643
128.3
Naive CD8 T-cell nTPM: 134.4
Samples: 4
Max nTPM: 208.8
Min nTPM: 57.8
RHH5201_R3572
208.8
RHH5229_R3601
57.8
RHH5258_R3630
135.1
RHH5287_R3659
135.8
Non-Vd2 gdTCR nTPM: 191.3
Samples: 4
Max nTPM: 224.6
Min nTPM: 158.3
RHH5235_R3607
158.3
RHH5264_R3636
224.6
RHH5207_R3578
208.5
RHH5299_R3665
173.8
T-reg nTPM: 150.5
Samples: 4
Max nTPM: 200.2
Min nTPM: 128.4
RHH5301_R3667
138.4
RHH5237_R3609
200.2
RHH5266_R3638
134.9
RHH5209_R3580
128.4
Terminal effector memory CD4 T-cell nTPM: 189.7
Samples: 2
Max nTPM: 215.8
Min nTPM: 163.5
RHH5243_R3615
163.5
RHH5272_R3644
215.8
Terminal effector memory CD8 T-cell nTPM: 199.7
Samples: 4
Max nTPM: 243.4
Min nTPM: 137.6
RHH5232_R3604
224.1
RHH5204_R3575
243.4
RHH5261_R3633
137.6
RHH5296_R3662
193.5
Vd2 gdTCR nTPM: 187.2
Samples: 4
Max nTPM: 226.8
Min nTPM: 158.7
RHH5234_R3606
201.8
RHH5206_R3577
226.8
RHH5263_R3635
161.3
RHH5298_R3664
158.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
