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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.4
nTPM
Monaco:
226.8
nTPM
Schmiedel:
61.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.4
HPA sample
nTPM
gdT-cell nTPM: 63.6
Samples: 6
Max nTPM: 79.0
Min nTPM: 48.4
P10809_1007
51.6
P10809_1022
65.7
P10809_1041
65.4
P10809_1060
79.0
P10809_1077
48.4
P10809_1098
71.2
MAIT T-cell nTPM: 57.7
Samples: 6
Max nTPM: 80.1
Min nTPM: 39.0
P10809_1006
57.3
P10809_1024
80.1
P10809_1043
58.1
P10809_1062
56.6
P10809_1083
39.0
P10809_1097
55.2
Memory CD4 T-cell nTPM: 55.3
Samples: 6
Max nTPM: 57.9
Min nTPM: 47.7
P10809_1014
47.7
P10809_1026
57.1
P10809_1045
57.9
P10809_1064
56.4
P10809_1086
56.0
P10809_1113
56.8
Memory CD8 T-cell nTPM: 60.4
Samples: 5
Max nTPM: 65.6
Min nTPM: 56.1
P10809_1012
56.1
P10809_1027
60.3
P10809_1046
57.2
P10809_1065
65.6
P10809_1111
62.8
Naive CD4 T-cell nTPM: 51.2
Samples: 6
Max nTPM: 74.4
Min nTPM: 36.8
P10809_1015
36.8
P10809_1030
47.6
P10809_1049
74.4
P10809_1068
47.7
P10809_1085
49.5
P10809_1112
51.3
Naive CD8 T-cell nTPM: 52.9
Samples: 6
Max nTPM: 60.8
Min nTPM: 42.8
P10809_1016
42.8
P10809_1031
47.0
P10809_1050
60.8
P10809_1069
54.5
P10809_1087
55.9
P10809_1110
56.2
T-reg nTPM: 84.4
Samples: 6
Max nTPM: 97.6
Min nTPM: 62.0
P10809_1018
62.0
P10809_1037
93.5
P10809_1056
88.2
P10809_1075
85.3
P10809_1094
97.6
P10809_1106
79.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 180.9
Samples: 4
Max nTPM: 204.8
Min nTPM: 131.7
RHH5202_R3573
204.8
RHH5230_R3602
192.7
RHH5259_R3631
131.7
RHH5288_R3660
194.4
Effector memory CD8 T-cell nTPM: 216.6
Samples: 4
Max nTPM: 251.7
Min nTPM: 179.5
RHH5203_R3574
196.7
RHH5231_R3603
251.7
RHH5260_R3632
179.5
RHH5289_R3661
238.3
MAIT T-cell nTPM: 226.5
Samples: 4
Max nTPM: 240.5
Min nTPM: 204.6
RHH5233_R3605
234.0
RHH5205_R3576
204.6
RHH5262_R3634
226.7
RHH5297_R3663
240.5
Memory CD4 T-cell TFH nTPM: 224.7
Samples: 4
Max nTPM: 253.4
Min nTPM: 186.0
RHH5300_R3666
211.6
RHH5236_R3608
247.9
RHH5265_R3637
186.0
RHH5208_R3579
253.4
Memory CD4 T-cell Th1 nTPM: 168.0
Samples: 4
Max nTPM: 195.1
Min nTPM: 153.6
RHH5210_R3581
167.5
RHH5302_R3668
195.1
RHH5238_R3610
153.6
RHH5267_R3639
155.6
Memory CD4 T-cell Th1/Th17 nTPM: 174.4
Samples: 4
Max nTPM: 233.1
Min nTPM: 120.4
RHH5303_R3669
212.5
RHH5211_R3582
233.1
RHH5239_R3611
120.4
RHH5268_R3640
131.5
Memory CD4 T-cell Th17 nTPM: 184.6
Samples: 4
Max nTPM: 201.4
Min nTPM: 156.1
RHH5304_R3670
201.3
RHH5212_R3583
201.4
RHH5240_R3612
179.5
RHH5269_R3641
156.1
Memory CD4 T-cell Th2 nTPM: 191.6
Samples: 4
Max nTPM: 205.4
Min nTPM: 179.9
RHH5305_R3671
205.4
RHH5213_R3584
179.9
RHH5241_R3613
196.3
RHH5270_R3642
184.9
Naive CD4 T-cell nTPM: 182.1
Samples: 4
Max nTPM: 232.4
Min nTPM: 149.4
RHH5306_R3672
177.4
RHH5214_R3585
232.4
RHH5242_R3614
169.0
RHH5271_R3643
149.4
Naive CD8 T-cell nTPM: 185.8
Samples: 4
Max nTPM: 239.4
Min nTPM: 132.8
RHH5201_R3572
239.4
RHH5229_R3601
132.8
RHH5258_R3630
171.4
RHH5287_R3659
199.4
Non-Vd2 gdTCR nTPM: 212.8
Samples: 4
Max nTPM: 255.6
Min nTPM: 164.5
RHH5235_R3607
164.5
RHH5264_R3636
219.0
RHH5207_R3578
255.6
RHH5299_R3665
211.9
T-reg nTPM: 183.0
Samples: 4
Max nTPM: 196.6
Min nTPM: 169.4
RHH5301_R3667
195.3
RHH5237_R3609
196.6
RHH5266_R3638
169.4
RHH5209_R3580
170.8
Terminal effector memory CD4 T-cell nTPM: 218.2
Samples: 2
Max nTPM: 225.5
Min nTPM: 210.9
RHH5243_R3615
210.9
RHH5272_R3644
225.5
Terminal effector memory CD8 T-cell nTPM: 208.3
Samples: 4
Max nTPM: 234.8
Min nTPM: 188.9
RHH5232_R3604
234.8
RHH5204_R3575
201.5
RHH5261_R3633
188.9
RHH5296_R3662
207.8
Vd2 gdTCR nTPM: 226.7
Samples: 4
Max nTPM: 258.7
Min nTPM: 184.9
RHH5234_R3606
235.2
RHH5206_R3577
258.7
RHH5263_R3635
228.1
RHH5298_R3664
184.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
