We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
IP6K2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • IP6K2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:52.4 nTPM
FANTOM5:151.5 Scaled Tags Per Million
Pig:55.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007532
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 52.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 52.4
Samples: 246

Max nTPM: 92.9
Min nTPM: 29.1
Std nTPM: 9.9
Median nTPM: 51.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 92.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 86.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 82.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 77.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 75.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 73.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 71.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 70.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 70.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 70.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 69.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 68.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 68.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 67.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 67.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 67.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 64.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 64.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 63.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 63.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 61.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 61.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 61.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 61.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 61.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 60.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 60.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 60.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 60.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 60.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 59.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 59.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 58.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 58.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 58.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 58.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 58.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 57.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 57.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 57.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 57.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 57.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 56.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 56.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 56.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 56.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 56.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 56.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 56.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 55.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 55.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 54.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 54.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 54.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 54.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 54.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 53.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 53.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 53.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 53.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 53.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 53.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 53.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 53.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 53.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 52.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 52.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 52.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 52.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 51.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 51.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 51.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 51.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 51.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 51.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 51.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 51.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 51.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 51.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 50.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 50.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 50.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 50.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 50.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 50.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 50.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 49.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 49.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 49.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 49.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 49.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 49.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 49.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 48.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 48.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 48.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 48.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 48.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 48.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 47.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 47.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 47.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 46.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 46.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 46.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 46.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 46.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 45.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 45.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 45.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 45.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 45.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 45.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 44.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 44.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 44.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 44.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 44.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 44.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 44.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 43.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 43.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 43.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 42.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 42.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 42.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 42.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 42.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 42.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 42.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 41.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 41.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 40.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 40.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 40.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 39.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 38.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 38.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 37.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 37.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 37.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 37.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 37.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 37.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 36.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 36.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 35.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 34.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 34.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 33.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 32.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 31.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 30.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 30.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.1
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 151.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 151.5
FF:10164-103B2 76 years, female 151.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 55.6
Pig sample Sample description nTPM
Caudate
nTPM: 55.7
Samples: 4

Max nTPM: 66.3
Min nTPM: 51.1
Sample A Female 52.7
Sample B Female 52.5
Sample C Male 66.3
Sample D Male 51.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org