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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.5
nTPM
Monaco:
112.2
nTPM
Schmiedel:
156.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.5
HPA sample
nTPM
gdT-cell nTPM: 29.2
Samples: 6
Max nTPM: 35.7
Min nTPM: 25.6
P10809_1007
28.9
P10809_1022
26.7
P10809_1041
25.6
P10809_1060
31.5
P10809_1077
35.7
P10809_1098
26.8
MAIT T-cell nTPM: 35.4
Samples: 6
Max nTPM: 44.1
Min nTPM: 19.5
P10809_1006
31.6
P10809_1024
44.1
P10809_1043
19.5
P10809_1062
40.9
P10809_1083
39.6
P10809_1097
36.5
Memory CD4 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 39.4
Min nTPM: 21.8
P10809_1014
27.8
P10809_1026
21.8
P10809_1045
26.9
P10809_1064
33.6
P10809_1086
39.4
P10809_1113
29.6
Memory CD8 T-cell nTPM: 32.7
Samples: 5
Max nTPM: 37.6
Min nTPM: 23.4
P10809_1012
33.1
P10809_1027
37.6
P10809_1046
23.4
P10809_1065
34.3
P10809_1111
34.9
Naive CD4 T-cell nTPM: 26.3
Samples: 6
Max nTPM: 31.2
Min nTPM: 21.2
P10809_1015
29.3
P10809_1030
21.2
P10809_1049
21.6
P10809_1068
29.6
P10809_1085
31.2
P10809_1112
25.1
Naive CD8 T-cell nTPM: 29.1
Samples: 6
Max nTPM: 39.8
Min nTPM: 22.2
P10809_1016
26.9
P10809_1031
22.2
P10809_1050
23.0
P10809_1069
37.4
P10809_1087
39.8
P10809_1110
25.3
T-reg nTPM: 42.4
Samples: 6
Max nTPM: 55.4
Min nTPM: 25.3
P10809_1018
43.4
P10809_1037
36.3
P10809_1056
25.3
P10809_1075
46.9
P10809_1094
55.4
P10809_1106
47.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.2
Samples: 4
Max nTPM: 137.9
Min nTPM: 98.3
RHH5202_R3573
113.7
RHH5230_R3602
98.3
RHH5259_R3631
137.9
RHH5288_R3660
98.9
Effector memory CD8 T-cell nTPM: 95.0
Samples: 4
Max nTPM: 119.2
Min nTPM: 68.2
RHH5203_R3574
108.4
RHH5231_R3603
84.2
RHH5260_R3632
119.2
RHH5289_R3661
68.2
MAIT T-cell nTPM: 83.0
Samples: 4
Max nTPM: 101.7
Min nTPM: 62.6
RHH5233_R3605
80.9
RHH5205_R3576
101.7
RHH5262_R3634
86.6
RHH5297_R3663
62.6
Memory CD4 T-cell TFH nTPM: 101.6
Samples: 4
Max nTPM: 124.3
Min nTPM: 78.9
RHH5300_R3666
78.9
RHH5236_R3608
103.2
RHH5265_R3637
100.1
RHH5208_R3579
124.3
Memory CD4 T-cell Th1 nTPM: 96.8
Samples: 4
Max nTPM: 143.1
Min nTPM: 64.1
RHH5210_R3581
95.3
RHH5302_R3668
64.1
RHH5238_R3610
143.1
RHH5267_R3639
84.5
Memory CD4 T-cell Th1/Th17 nTPM: 100.3
Samples: 4
Max nTPM: 122.3
Min nTPM: 72.9
RHH5303_R3669
72.9
RHH5211_R3582
115.1
RHH5239_R3611
122.3
RHH5268_R3640
91.0
Memory CD4 T-cell Th17 nTPM: 110.7
Samples: 4
Max nTPM: 154.4
Min nTPM: 81.8
RHH5304_R3670
94.8
RHH5212_R3583
111.9
RHH5240_R3612
154.4
RHH5269_R3641
81.8
Memory CD4 T-cell Th2 nTPM: 86.4
Samples: 4
Max nTPM: 107.5
Min nTPM: 70.6
RHH5305_R3671
85.4
RHH5213_R3584
107.5
RHH5241_R3613
70.6
RHH5270_R3642
82.1
Naive CD4 T-cell nTPM: 73.8
Samples: 4
Max nTPM: 83.6
Min nTPM: 60.9
RHH5306_R3672
70.0
RHH5214_R3585
83.6
RHH5242_R3614
60.9
RHH5271_R3643
80.6
Naive CD8 T-cell nTPM: 87.0
Samples: 4
Max nTPM: 102.2
Min nTPM: 69.1
RHH5201_R3572
101.1
RHH5229_R3601
102.2
RHH5258_R3630
75.7
RHH5287_R3659
69.1
Non-Vd2 gdTCR nTPM: 73.0
Samples: 4
Max nTPM: 97.9
Min nTPM: 51.0
RHH5235_R3607
97.9
RHH5264_R3636
72.5
RHH5207_R3578
70.4
RHH5299_R3665
51.0
T-reg nTPM: 92.4
Samples: 4
Max nTPM: 106.8
Min nTPM: 76.9
RHH5301_R3667
76.9
RHH5237_R3609
96.3
RHH5266_R3638
89.7
RHH5209_R3580
106.8
Terminal effector memory CD4 T-cell nTPM: 77.4
Samples: 2
Max nTPM: 81.1
Min nTPM: 73.7
RHH5243_R3615
81.1
RHH5272_R3644
73.7
Terminal effector memory CD8 T-cell nTPM: 80.6
Samples: 4
Max nTPM: 101.7
Min nTPM: 63.9
RHH5232_R3604
79.1
RHH5204_R3575
77.5
RHH5261_R3633
101.7
RHH5296_R3662
63.9
Vd2 gdTCR nTPM: 84.2
Samples: 4
Max nTPM: 112.2
Min nTPM: 70.2
RHH5234_R3606
79.8
RHH5206_R3577
74.4
RHH5263_R3635
112.2
RHH5298_R3664
70.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
