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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
94.1
nTPM
Monaco:
197.6
nTPM
Schmiedel:
484.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.1
HPA sample
nTPM
gdT-cell nTPM: 70.6
Samples: 6
Max nTPM: 100.2
Min nTPM: 55.2
P10809_1007
55.2
P10809_1022
81.1
P10809_1041
100.2
P10809_1060
56.8
P10809_1077
67.8
P10809_1098
62.7
MAIT T-cell nTPM: 37.4
Samples: 6
Max nTPM: 42.7
Min nTPM: 26.7
P10809_1006
26.7
P10809_1024
38.0
P10809_1043
41.3
P10809_1062
36.5
P10809_1083
39.2
P10809_1097
42.7
Memory CD4 T-cell nTPM: 73.2
Samples: 6
Max nTPM: 98.2
Min nTPM: 56.9
P10809_1014
61.9
P10809_1026
98.2
P10809_1045
80.5
P10809_1064
79.4
P10809_1086
56.9
P10809_1113
62.4
Memory CD8 T-cell nTPM: 57.2
Samples: 5
Max nTPM: 68.1
Min nTPM: 42.5
P10809_1012
42.5
P10809_1027
62.5
P10809_1046
68.1
P10809_1065
55.5
P10809_1111
57.5
Naive CD4 T-cell nTPM: 93.0
Samples: 6
Max nTPM: 126.8
Min nTPM: 64.3
P10809_1015
64.3
P10809_1030
100.4
P10809_1049
126.8
P10809_1068
85.3
P10809_1085
87.0
P10809_1112
94.2
Naive CD8 T-cell nTPM: 83.4
Samples: 6
Max nTPM: 112.4
Min nTPM: 49.5
P10809_1016
77.3
P10809_1031
112.4
P10809_1050
75.7
P10809_1069
106.6
P10809_1087
49.5
P10809_1110
79.0
T-reg nTPM: 94.1
Samples: 6
Max nTPM: 126.0
Min nTPM: 75.1
P10809_1018
76.0
P10809_1037
88.9
P10809_1056
126.0
P10809_1075
99.9
P10809_1094
75.1
P10809_1106
98.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
197.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 124.0
Samples: 4
Max nTPM: 156.5
Min nTPM: 78.3
RHH5202_R3573
78.3
RHH5230_R3602
140.0
RHH5259_R3631
156.5
RHH5288_R3660
121.2
Effector memory CD8 T-cell nTPM: 133.6
Samples: 4
Max nTPM: 179.9
Min nTPM: 82.7
RHH5203_R3574
117.5
RHH5231_R3603
154.4
RHH5260_R3632
179.9
RHH5289_R3661
82.7
MAIT T-cell nTPM: 84.0
Samples: 4
Max nTPM: 110.9
Min nTPM: 66.0
RHH5233_R3605
66.0
RHH5205_R3576
78.0
RHH5262_R3634
110.9
RHH5297_R3663
81.2
Memory CD4 T-cell TFH nTPM: 144.9
Samples: 4
Max nTPM: 190.5
Min nTPM: 87.9
RHH5300_R3666
153.8
RHH5236_R3608
190.5
RHH5265_R3637
147.4
RHH5208_R3579
87.9
Memory CD4 T-cell Th1 nTPM: 168.3
Samples: 4
Max nTPM: 207.2
Min nTPM: 145.9
RHH5210_R3581
154.8
RHH5302_R3668
145.9
RHH5238_R3610
165.1
RHH5267_R3639
207.2
Memory CD4 T-cell Th1/Th17 nTPM: 150.6
Samples: 4
Max nTPM: 218.5
Min nTPM: 82.2
RHH5303_R3669
82.2
RHH5211_R3582
146.7
RHH5239_R3611
154.8
RHH5268_R3640
218.5
Memory CD4 T-cell Th17 nTPM: 169.8
Samples: 4
Max nTPM: 218.3
Min nTPM: 141.0
RHH5304_R3670
141.0
RHH5212_R3583
164.4
RHH5240_R3612
155.5
RHH5269_R3641
218.3
Memory CD4 T-cell Th2 nTPM: 158.2
Samples: 4
Max nTPM: 215.8
Min nTPM: 105.1
RHH5305_R3671
136.4
RHH5213_R3584
175.4
RHH5241_R3613
105.1
RHH5270_R3642
215.8
Naive CD4 T-cell nTPM: 197.6
Samples: 4
Max nTPM: 227.2
Min nTPM: 125.3
RHH5306_R3672
227.2
RHH5214_R3585
218.1
RHH5242_R3614
125.3
RHH5271_R3643
219.8
Naive CD8 T-cell nTPM: 196.9
Samples: 4
Max nTPM: 276.4
Min nTPM: 86.9
RHH5201_R3572
86.9
RHH5229_R3601
276.4
RHH5258_R3630
234.3
RHH5287_R3659
190.1
Non-Vd2 gdTCR nTPM: 132.7
Samples: 4
Max nTPM: 144.4
Min nTPM: 113.0
RHH5235_R3607
136.4
RHH5264_R3636
144.4
RHH5207_R3578
136.8
RHH5299_R3665
113.0
T-reg nTPM: 172.4
Samples: 4
Max nTPM: 197.2
Min nTPM: 151.5
RHH5301_R3667
160.6
RHH5237_R3609
180.3
RHH5266_R3638
197.2
RHH5209_R3580
151.5
Terminal effector memory CD4 T-cell nTPM: 136.5
Samples: 2
Max nTPM: 140.1
Min nTPM: 132.9
RHH5243_R3615
132.9
RHH5272_R3644
140.1
Terminal effector memory CD8 T-cell nTPM: 133.3
Samples: 4
Max nTPM: 206.1
Min nTPM: 70.7
RHH5232_R3604
103.7
RHH5204_R3575
152.5
RHH5261_R3633
206.1
RHH5296_R3662
70.7
Vd2 gdTCR nTPM: 122.6
Samples: 4
Max nTPM: 143.2
Min nTPM: 95.8
RHH5234_R3606
115.1
RHH5206_R3577
136.2
RHH5263_R3635
143.2
RHH5298_R3664
95.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
