HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:40.8 nTPM
HPA Brain:84.4 nTPM
GTEx:40.8 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:57.7 nTPM
Mouse:85.5 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036607
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.4
Sample id Sample description nTPM
Hippocampus
nTPM: 54.1
2621 Female, age 67, right hemisphere 68.8
1898 Male, age 80, left hemisphere 59.6
2148 Female, age 91, left hemisphere 52.5
1855 Male, age 76, left hemisphere 50.9
2529 Female, age 94, left hemisphere 47.0
1911 Female, age 85, right hemisphere 46.2
Dentate gyrus
nTPM: 59.2
2530 Female, age 94, left hemisphere 80.0
1927 Female, age 91, both hemispheres 60.2
2531 Female, age 67, both hemispheres 58.2
2010 Male, age 76, both hemispheres 55.4
2528 Male, age 74, both hemispheres 52.3
2246 Female, age 85, both hemispheres 48.8
Entorhinal gyrus
nTPM: 84.4
2613 Female, age 94, left hemisphere 131.5
2686 Male, age 75, right hemisphere 93.5
2764 Male, age 80, right hemisphere 84.6
1787 Male, age 76, left hemisphere 71.6
1938 Female, age 85, left hemisphere 69.3
2117 Female, age 91, right hemisphere 55.8
Hippocampus, CA1
nTPM: 53.3
2749 Male, age 80, left hemisphere 74.5
2527 Male, age 74, both hemispheres 52.3
1873 Female, age 85, both hemispheres 50.3
2082 Female, age 91, right hemisphere 45.5
2045 Male, age 76, both hemispheres 44.1
Hippocampus, CA2
nTPM: 55.0
2437 Female, age 94, left hemisphere 67.5
1963 Male, age 80, left hemisphere 65.1
1892 Male, age 76, both hemispheres 60.6
1940 Female, age 85, left hemisphere 50.3
2113 Female, age 91, right hemisphere 43.6
2249 Male, age 74, both hemispheres 42.8
Hippocampus, CA3
nTPM: 58.0
2861 Female, age 67, both hemispheres 72.5
2620 Female, age 94, left hemisphere 68.8
2137 Male, age 80, left hemisphere 58.6
1867 Male, age 76, both hemispheres 55.5
1891 Female, age 85, both hemispheres 48.8
2436 Male, age 74, both hemispheres 43.8
Parahippocampal cortex
nTPM: 67.9
2622 Female, age 67, right hemisphere 91.9
2693 Female, age 94, both hemispheres 73.7
1850 Male, age 80, both hemispheres 73.6
2532 Female, age 72, left hemisphere 71.7
1990 Female, age 91, right hemisphere 69.7
2692 Male, age 74, both hemispheres 69.7
2245 Female, age 91, both hemispheres 61.1
1933 Female, age 85, both hemispheres 59.5
2250 Female, age 67, right hemisphere 55.5
2018 Male, age 76, both hemispheres 53.1
Perirhinal gyrus
nTPM: 65.4
1847 Female, age 91, left hemisphere 74.8
1794 Male, age 80, right hemisphere 71.7
2848 Male, age 76, right hemisphere 60.6
2521 Female, age 94, right hemisphere 60.4
1841 Female, age 85, right hemisphere 59.4
Subiculum
nTPM: 62.0
2619 Male, age 74, both hemispheres 69.6
2438 Female, age 94, left hemisphere 69.4
1977 Female, age 85, both hemispheres 67.7
1901 Male, age 80, both hemispheres 61.7
2042 Male, age 76, both hemispheres 58.1
2729 Female, age 91, right hemisphere 45.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.8
Samples: 197

Max nTPM: 70.9
Min nTPM: 19.2
Std nTPM: 10.5
Median nTPM: 39.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 70.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 68.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 68.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 65.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 62.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 62.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 61.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 59.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 59.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 59.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.5
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 58.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.7
Pig sample Sample description nTPM
Subiculum
nTPM: 52.9
Samples: 4

Max nTPM: 69.9
Min nTPM: 43.0
Sample A Female 69.9
Sample B Female 45.6
Sample C Male 52.9
Sample D Male 43.0
Dorsal hippocampus
nTPM: 55.3
Samples: 4

Max nTPM: 65.4
Min nTPM: 44.2
Sample A Female 65.4
Sample B Female 54.3
Sample C Male 57.4
Sample D Male 44.2
Entorhinal cortex
nTPM: 57.7
Samples: 4

Max nTPM: 59.3
Min nTPM: 55.3
Sample A Female 59.3
Sample B Female 57.6
Sample C Male 58.4
Sample D Male 55.3
Ventral hippocampus
nTPM: 55.1
Samples: 4

Max nTPM: 70.9
Min nTPM: 38.2
Sample A Female 53.3
Sample B Female 38.2
Sample C Male 70.9
Sample D Male 58.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.5
Samples: 4

Max nTPM: 90.2
Min nTPM: 79.5
Sample A Male 83.8
Sample B Male 88.5
Sample C Female 79.5
Sample D Female 90.2
Hippocampal formation
nTPM: 73.4
Samples: 4

Max nTPM: 75.7
Min nTPM: 70.5
Sample A Male 75.2
Sample B Male 70.5
Sample C Female 72.3
Sample D Female 75.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
68844032 Antisense, RP_050217_02_G06, Mouse strain C57BL/6J (56 days, male) 11.5
74819327 Antisense, RP_060315_02_E03, Mouse strain C57BL/6J (56 days, male) 7.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org