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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
29.9
nTPM
Monaco:
228.3
nTPM
Schmiedel:
192.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.9
HPA sample
nTPM
gdT-cell nTPM: 29.9
Samples: 6
Max nTPM: 39.5
Min nTPM: 21.2
P10809_1007
39.5
P10809_1022
38.3
P10809_1041
22.0
P10809_1060
24.7
P10809_1077
21.2
P10809_1098
33.6
MAIT T-cell nTPM: 26.9
Samples: 6
Max nTPM: 41.2
Min nTPM: 18.0
P10809_1006
41.2
P10809_1024
34.9
P10809_1043
24.3
P10809_1062
19.9
P10809_1083
18.0
P10809_1097
23.1
Memory CD4 T-cell nTPM: 18.3
Samples: 6
Max nTPM: 26.9
Min nTPM: 12.2
P10809_1014
26.9
P10809_1026
18.7
P10809_1045
18.7
P10809_1064
13.8
P10809_1086
12.2
P10809_1113
19.2
Memory CD8 T-cell nTPM: 28.0
Samples: 5
Max nTPM: 39.0
Min nTPM: 18.6
P10809_1012
39.0
P10809_1027
32.1
P10809_1046
26.9
P10809_1065
18.6
P10809_1111
23.4
Naive CD4 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 32.7
Min nTPM: 10.1
P10809_1015
23.7
P10809_1030
32.7
P10809_1049
14.4
P10809_1068
10.1
P10809_1085
12.9
P10809_1112
19.0
Naive CD8 T-cell nTPM: 20.7
Samples: 6
Max nTPM: 27.5
Min nTPM: 14.2
P10809_1016
26.3
P10809_1031
16.6
P10809_1050
14.2
P10809_1069
17.1
P10809_1087
22.6
P10809_1110
27.5
T-reg nTPM: 19.1
Samples: 6
Max nTPM: 30.2
Min nTPM: 12.1
P10809_1018
30.2
P10809_1037
21.7
P10809_1056
21.4
P10809_1075
14.8
P10809_1094
14.4
P10809_1106
12.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
228.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.4
Samples: 4
Max nTPM: 156.0
Min nTPM: 141.6
RHH5202_R3573
142.1
RHH5230_R3602
156.0
RHH5259_R3631
141.6
RHH5288_R3660
145.9
Effector memory CD8 T-cell nTPM: 189.4
Samples: 4
Max nTPM: 208.5
Min nTPM: 176.6
RHH5203_R3574
188.6
RHH5231_R3603
176.6
RHH5260_R3632
208.5
RHH5289_R3661
183.9
MAIT T-cell nTPM: 172.1
Samples: 4
Max nTPM: 203.4
Min nTPM: 148.9
RHH5233_R3605
182.8
RHH5205_R3576
203.4
RHH5262_R3634
153.3
RHH5297_R3663
148.9
Memory CD4 T-cell TFH nTPM: 128.4
Samples: 4
Max nTPM: 149.2
Min nTPM: 101.2
RHH5300_R3666
126.8
RHH5236_R3608
101.2
RHH5265_R3637
149.2
RHH5208_R3579
136.5
Memory CD4 T-cell Th1 nTPM: 129.7
Samples: 4
Max nTPM: 141.3
Min nTPM: 124.2
RHH5210_R3581
128.7
RHH5302_R3668
141.3
RHH5238_R3610
124.5
RHH5267_R3639
124.2
Memory CD4 T-cell Th1/Th17 nTPM: 162.9
Samples: 4
Max nTPM: 172.7
Min nTPM: 155.4
RHH5303_R3669
155.4
RHH5211_R3582
165.4
RHH5239_R3611
172.7
RHH5268_R3640
158.2
Memory CD4 T-cell Th17 nTPM: 169.6
Samples: 4
Max nTPM: 227.5
Min nTPM: 143.4
RHH5304_R3670
143.4
RHH5212_R3583
227.5
RHH5240_R3612
161.7
RHH5269_R3641
145.7
Memory CD4 T-cell Th2 nTPM: 122.1
Samples: 4
Max nTPM: 127.9
Min nTPM: 111.1
RHH5305_R3671
111.1
RHH5213_R3584
126.5
RHH5241_R3613
122.9
RHH5270_R3642
127.9
Naive CD4 T-cell nTPM: 120.7
Samples: 4
Max nTPM: 136.6
Min nTPM: 100.5
RHH5306_R3672
132.4
RHH5214_R3585
100.5
RHH5242_R3614
136.6
RHH5271_R3643
113.2
Naive CD8 T-cell nTPM: 128.8
Samples: 4
Max nTPM: 160.0
Min nTPM: 107.5
RHH5201_R3572
107.5
RHH5229_R3601
125.6
RHH5258_R3630
122.0
RHH5287_R3659
160.0
Non-Vd2 gdTCR nTPM: 199.7
Samples: 4
Max nTPM: 240.0
Min nTPM: 162.8
RHH5235_R3607
240.0
RHH5264_R3636
186.7
RHH5207_R3578
209.2
RHH5299_R3665
162.8
T-reg nTPM: 125.4
Samples: 4
Max nTPM: 136.3
Min nTPM: 96.4
RHH5301_R3667
136.3
RHH5237_R3609
96.4
RHH5266_R3638
134.1
RHH5209_R3580
134.7
Terminal effector memory CD4 T-cell nTPM: 221.7
Samples: 2
Max nTPM: 239.8
Min nTPM: 203.5
RHH5243_R3615
239.8
RHH5272_R3644
203.5
Terminal effector memory CD8 T-cell nTPM: 228.3
Samples: 4
Max nTPM: 256.2
Min nTPM: 191.0
RHH5232_R3604
256.2
RHH5204_R3575
191.0
RHH5261_R3633
237.1
RHH5296_R3662
229.0
Vd2 gdTCR nTPM: 201.0
Samples: 4
Max nTPM: 221.7
Min nTPM: 180.9
RHH5234_R3606
180.9
RHH5206_R3577
217.5
RHH5263_R3635
221.7
RHH5298_R3664
184.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
