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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
223.9
nTPM
Monaco:
555.6
nTPM
Schmiedel:
684.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
223.9
HPA sample
nTPM
gdT-cell nTPM: 188.8
Samples: 6
Max nTPM: 217.4
Min nTPM: 141.4
P10809_1007
141.4
P10809_1022
217.4
P10809_1041
205.3
P10809_1060
201.7
P10809_1077
191.5
P10809_1098
175.5
MAIT T-cell nTPM: 114.9
Samples: 6
Max nTPM: 167.4
Min nTPM: 89.6
P10809_1006
89.6
P10809_1024
99.6
P10809_1043
103.5
P10809_1062
110.1
P10809_1083
167.4
P10809_1097
118.9
Memory CD4 T-cell nTPM: 184.0
Samples: 6
Max nTPM: 253.3
Min nTPM: 130.0
P10809_1014
130.0
P10809_1026
173.2
P10809_1045
199.4
P10809_1064
197.3
P10809_1086
253.3
P10809_1113
150.7
Memory CD8 T-cell nTPM: 208.9
Samples: 5
Max nTPM: 230.2
Min nTPM: 158.1
P10809_1012
158.1
P10809_1027
223.8
P10809_1046
205.8
P10809_1065
226.7
P10809_1111
230.2
Naive CD4 T-cell nTPM: 193.2
Samples: 6
Max nTPM: 264.5
Min nTPM: 143.3
P10809_1015
143.3
P10809_1030
184.2
P10809_1049
264.5
P10809_1068
188.6
P10809_1085
215.9
P10809_1112
162.4
Naive CD8 T-cell nTPM: 223.9
Samples: 6
Max nTPM: 261.0
Min nTPM: 146.3
P10809_1016
146.3
P10809_1031
243.8
P10809_1050
245.4
P10809_1069
256.3
P10809_1087
261.0
P10809_1110
190.4
T-reg nTPM: 175.9
Samples: 6
Max nTPM: 234.5
Min nTPM: 110.5
P10809_1018
110.5
P10809_1037
234.5
P10809_1056
169.1
P10809_1075
170.7
P10809_1094
206.4
P10809_1106
163.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
555.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 423.5
Samples: 4
Max nTPM: 503.4
Min nTPM: 369.2
RHH5202_R3573
503.4
RHH5230_R3602
369.2
RHH5259_R3631
369.9
RHH5288_R3660
451.4
Effector memory CD8 T-cell nTPM: 540.6
Samples: 4
Max nTPM: 583.4
Min nTPM: 487.5
RHH5203_R3574
583.4
RHH5231_R3603
557.9
RHH5260_R3632
487.5
RHH5289_R3661
533.4
MAIT T-cell nTPM: 322.4
Samples: 4
Max nTPM: 366.8
Min nTPM: 268.9
RHH5233_R3605
355.1
RHH5205_R3576
366.8
RHH5262_R3634
268.9
RHH5297_R3663
298.9
Memory CD4 T-cell TFH nTPM: 454.5
Samples: 4
Max nTPM: 601.6
Min nTPM: 364.4
RHH5300_R3666
395.9
RHH5236_R3608
601.6
RHH5265_R3637
364.4
RHH5208_R3579
456.0
Memory CD4 T-cell Th1 nTPM: 404.5
Samples: 4
Max nTPM: 449.2
Min nTPM: 374.6
RHH5210_R3581
449.2
RHH5302_R3668
390.9
RHH5238_R3610
403.4
RHH5267_R3639
374.6
Memory CD4 T-cell Th1/Th17 nTPM: 437.8
Samples: 4
Max nTPM: 508.3
Min nTPM: 332.1
RHH5303_R3669
429.7
RHH5211_R3582
508.3
RHH5239_R3611
480.9
RHH5268_R3640
332.1
Memory CD4 T-cell Th17 nTPM: 352.3
Samples: 4
Max nTPM: 419.3
Min nTPM: 270.7
RHH5304_R3670
345.5
RHH5212_R3583
419.3
RHH5240_R3612
373.7
RHH5269_R3641
270.7
Memory CD4 T-cell Th2 nTPM: 317.2
Samples: 4
Max nTPM: 398.8
Min nTPM: 257.9
RHH5305_R3671
289.5
RHH5213_R3584
322.7
RHH5241_R3613
398.8
RHH5270_R3642
257.9
Naive CD4 T-cell nTPM: 387.2
Samples: 4
Max nTPM: 469.4
Min nTPM: 303.8
RHH5306_R3672
303.8
RHH5214_R3585
469.4
RHH5242_R3614
445.2
RHH5271_R3643
330.2
Naive CD8 T-cell nTPM: 469.1
Samples: 4
Max nTPM: 504.3
Min nTPM: 401.1
RHH5201_R3572
504.3
RHH5229_R3601
489.2
RHH5258_R3630
401.1
RHH5287_R3659
481.8
Non-Vd2 gdTCR nTPM: 398.1
Samples: 4
Max nTPM: 433.1
Min nTPM: 335.6
RHH5235_R3607
401.8
RHH5264_R3636
421.7
RHH5207_R3578
433.1
RHH5299_R3665
335.6
T-reg nTPM: 376.9
Samples: 4
Max nTPM: 454.8
Min nTPM: 313.2
RHH5301_R3667
317.7
RHH5237_R3609
421.8
RHH5266_R3638
313.2
RHH5209_R3580
454.8
Terminal effector memory CD4 T-cell nTPM: 555.6
Samples: 2
Max nTPM: 605.7
Min nTPM: 505.5
RHH5243_R3615
605.7
RHH5272_R3644
505.5
Terminal effector memory CD8 T-cell nTPM: 498.3
Samples: 4
Max nTPM: 559.5
Min nTPM: 440.3
RHH5232_R3604
515.1
RHH5204_R3575
559.5
RHH5261_R3633
440.3
RHH5296_R3662
478.2
Vd2 gdTCR nTPM: 491.9
Samples: 4
Max nTPM: 676.4
Min nTPM: 387.7
RHH5234_R3606
438.9
RHH5206_R3577
676.4
RHH5263_R3635
464.4
RHH5298_R3664
387.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.