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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.7
nTPM
Monaco:
304.2
nTPM
Schmiedel:
310.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.7
HPA sample
nTPM
gdT-cell nTPM: 23.3
Samples: 6
Max nTPM: 36.5
Min nTPM: 13.4
P10809_1007
21.5
P10809_1022
23.3
P10809_1041
20.9
P10809_1060
24.1
P10809_1077
36.5
P10809_1098
13.4
MAIT T-cell nTPM: 26.7
Samples: 6
Max nTPM: 35.3
Min nTPM: 16.9
P10809_1006
35.3
P10809_1024
21.0
P10809_1043
16.9
P10809_1062
34.0
P10809_1083
25.2
P10809_1097
27.9
Memory CD4 T-cell nTPM: 17.4
Samples: 6
Max nTPM: 26.1
Min nTPM: 11.8
P10809_1014
11.8
P10809_1026
14.8
P10809_1045
17.1
P10809_1064
26.1
P10809_1086
22.3
P10809_1113
12.4
Memory CD8 T-cell nTPM: 16.0
Samples: 5
Max nTPM: 21.5
Min nTPM: 11.3
P10809_1012
13.5
P10809_1027
17.8
P10809_1046
16.0
P10809_1065
21.5
P10809_1111
11.3
Naive CD4 T-cell nTPM: 5.4
Samples: 6
Max nTPM: 6.8
Min nTPM: 3.7
P10809_1015
5.8
P10809_1030
3.7
P10809_1049
4.7
P10809_1068
6.0
P10809_1085
6.8
P10809_1112
5.3
Naive CD8 T-cell nTPM: 11.6
Samples: 6
Max nTPM: 18.9
Min nTPM: 5.6
P10809_1016
5.6
P10809_1031
7.9
P10809_1050
12.1
P10809_1069
18.0
P10809_1087
18.9
P10809_1110
6.8
T-reg nTPM: 16.3
Samples: 6
Max nTPM: 21.4
Min nTPM: 10.4
P10809_1018
17.2
P10809_1037
16.6
P10809_1056
15.0
P10809_1075
10.4
P10809_1094
17.4
P10809_1106
21.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
304.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.2
Samples: 4
Max nTPM: 161.4
Min nTPM: 86.8
RHH5202_R3573
161.4
RHH5230_R3602
159.9
RHH5259_R3631
86.8
RHH5288_R3660
96.5
Effector memory CD8 T-cell nTPM: 131.3
Samples: 4
Max nTPM: 211.0
Min nTPM: 63.9
RHH5203_R3574
211.0
RHH5231_R3603
97.9
RHH5260_R3632
63.9
RHH5289_R3661
152.5
MAIT T-cell nTPM: 304.2
Samples: 4
Max nTPM: 406.1
Min nTPM: 192.5
RHH5233_R3605
389.0
RHH5205_R3576
406.1
RHH5262_R3634
229.0
RHH5297_R3663
192.5
Memory CD4 T-cell TFH nTPM: 153.7
Samples: 4
Max nTPM: 206.4
Min nTPM: 121.0
RHH5300_R3666
121.0
RHH5236_R3608
145.5
RHH5265_R3637
141.9
RHH5208_R3579
206.4
Memory CD4 T-cell Th1 nTPM: 108.3
Samples: 4
Max nTPM: 160.0
Min nTPM: 72.9
RHH5210_R3581
160.0
RHH5302_R3668
72.9
RHH5238_R3610
110.0
RHH5267_R3639
90.3
Memory CD4 T-cell Th1/Th17 nTPM: 180.7
Samples: 4
Max nTPM: 209.3
Min nTPM: 129.4
RHH5303_R3669
129.4
RHH5211_R3582
191.1
RHH5239_R3611
209.3
RHH5268_R3640
193.1
Memory CD4 T-cell Th17 nTPM: 192.1
Samples: 4
Max nTPM: 243.9
Min nTPM: 124.0
RHH5304_R3670
188.1
RHH5212_R3583
212.2
RHH5240_R3612
124.0
RHH5269_R3641
243.9
Memory CD4 T-cell Th2 nTPM: 94.8
Samples: 4
Max nTPM: 131.2
Min nTPM: 66.0
RHH5305_R3671
66.0
RHH5213_R3584
90.9
RHH5241_R3613
131.2
RHH5270_R3642
91.0
Naive CD4 T-cell nTPM: 60.1
Samples: 4
Max nTPM: 80.6
Min nTPM: 41.5
RHH5306_R3672
56.4
RHH5214_R3585
41.5
RHH5242_R3614
80.6
RHH5271_R3643
61.9
Naive CD8 T-cell nTPM: 69.9
Samples: 4
Max nTPM: 98.8
Min nTPM: 37.3
RHH5201_R3572
77.7
RHH5229_R3601
37.3
RHH5258_R3630
98.8
RHH5287_R3659
65.6
Non-Vd2 gdTCR nTPM: 119.4
Samples: 4
Max nTPM: 171.4
Min nTPM: 69.2
RHH5235_R3607
142.1
RHH5264_R3636
69.2
RHH5207_R3578
171.4
RHH5299_R3665
95.0
T-reg nTPM: 100.0
Samples: 4
Max nTPM: 116.5
Min nTPM: 87.4
RHH5301_R3667
90.9
RHH5237_R3609
87.4
RHH5266_R3638
116.5
RHH5209_R3580
105.0
Terminal effector memory CD4 T-cell nTPM: 226.4
Samples: 2
Max nTPM: 263.7
Min nTPM: 189.1
RHH5243_R3615
263.7
RHH5272_R3644
189.1
Terminal effector memory CD8 T-cell nTPM: 143.6
Samples: 4
Max nTPM: 201.6
Min nTPM: 68.9
RHH5232_R3604
201.6
RHH5204_R3575
198.7
RHH5261_R3633
68.9
RHH5296_R3662
105.0
Vd2 gdTCR nTPM: 186.6
Samples: 4
Max nTPM: 265.7
Min nTPM: 128.6
RHH5234_R3606
265.7
RHH5206_R3577
199.2
RHH5263_R3635
152.8
RHH5298_R3664
128.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
