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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.3
nTPM
Monaco:
393.0
nTPM
Schmiedel:
50.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.3
HPA sample
nTPM
gdT-cell nTPM: 35.3
Samples: 6
Max nTPM: 44.3
Min nTPM: 27.5
P10809_1007
44.3
P10809_1022
43.7
P10809_1041
27.5
P10809_1060
28.8
P10809_1077
35.4
P10809_1098
32.2
MAIT T-cell nTPM: 19.5
Samples: 6
Max nTPM: 25.1
Min nTPM: 14.9
P10809_1006
25.1
P10809_1024
20.0
P10809_1043
19.9
P10809_1062
16.4
P10809_1083
14.9
P10809_1097
20.8
Memory CD4 T-cell nTPM: 8.9
Samples: 6
Max nTPM: 15.9
Min nTPM: 4.1
P10809_1014
4.1
P10809_1026
5.1
P10809_1045
7.3
P10809_1064
15.1
P10809_1086
15.9
P10809_1113
5.7
Memory CD8 T-cell nTPM: 19.2
Samples: 5
Max nTPM: 28.1
Min nTPM: 14.2
P10809_1012
14.2
P10809_1027
18.8
P10809_1046
20.8
P10809_1065
28.1
P10809_1111
14.2
Naive CD4 T-cell nTPM: 2.7
Samples: 6
Max nTPM: 5.7
Min nTPM: 1.7
P10809_1015
2.4
P10809_1030
2.0
P10809_1049
1.7
P10809_1068
2.9
P10809_1085
5.7
P10809_1112
1.7
Naive CD8 T-cell nTPM: 12.8
Samples: 6
Max nTPM: 31.2
Min nTPM: 2.7
P10809_1016
2.7
P10809_1031
10.3
P10809_1050
11.6
P10809_1069
17.8
P10809_1087
31.2
P10809_1110
3.2
T-reg nTPM: 4.6
Samples: 6
Max nTPM: 8.5
Min nTPM: 2.5
P10809_1018
2.5
P10809_1037
3.1
P10809_1056
6.5
P10809_1075
4.0
P10809_1094
2.8
P10809_1106
8.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
393.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.3
Samples: 4
Max nTPM: 78.5
Min nTPM: 57.6
RHH5202_R3573
62.6
RHH5230_R3602
62.6
RHH5259_R3631
78.5
RHH5288_R3660
57.6
Effector memory CD8 T-cell nTPM: 241.7
Samples: 4
Max nTPM: 300.8
Min nTPM: 158.3
RHH5203_R3574
297.8
RHH5231_R3603
300.8
RHH5260_R3632
209.7
RHH5289_R3661
158.3
MAIT T-cell nTPM: 162.2
Samples: 4
Max nTPM: 242.5
Min nTPM: 114.2
RHH5233_R3605
171.5
RHH5205_R3576
242.5
RHH5262_R3634
114.2
RHH5297_R3663
120.6
Memory CD4 T-cell TFH nTPM: 19.7
Samples: 4
Max nTPM: 31.2
Min nTPM: 12.9
RHH5300_R3666
12.9
RHH5236_R3608
31.2
RHH5265_R3637
13.8
RHH5208_R3579
20.9
Memory CD4 T-cell Th1 nTPM: 73.6
Samples: 4
Max nTPM: 119.8
Min nTPM: 35.3
RHH5210_R3581
79.5
RHH5302_R3668
35.3
RHH5238_R3610
119.8
RHH5267_R3639
59.6
Memory CD4 T-cell Th1/Th17 nTPM: 76.4
Samples: 4
Max nTPM: 99.5
Min nTPM: 61.5
RHH5303_R3669
61.5
RHH5211_R3582
82.2
RHH5239_R3611
99.5
RHH5268_R3640
62.4
Memory CD4 T-cell Th17 nTPM: 68.7
Samples: 4
Max nTPM: 79.3
Min nTPM: 61.6
RHH5304_R3670
79.3
RHH5212_R3583
61.9
RHH5240_R3612
72.0
RHH5269_R3641
61.6
Memory CD4 T-cell Th2 nTPM: 53.4
Samples: 4
Max nTPM: 73.1
Min nTPM: 34.1
RHH5305_R3671
34.1
RHH5213_R3584
73.1
RHH5241_R3613
67.1
RHH5270_R3642
39.2
Naive CD4 T-cell nTPM: 16.4
Samples: 4
Max nTPM: 32.2
Min nTPM: 7.3
RHH5306_R3672
7.3
RHH5214_R3585
17.8
RHH5242_R3614
32.2
RHH5271_R3643
8.2
Naive CD8 T-cell nTPM: 7.8
Samples: 4
Max nTPM: 12.0
Min nTPM: 5.1
RHH5201_R3572
12.0
RHH5229_R3601
7.0
RHH5258_R3630
5.1
RHH5287_R3659
6.9
Non-Vd2 gdTCR nTPM: 269.6
Samples: 4
Max nTPM: 359.2
Min nTPM: 199.0
RHH5235_R3607
298.1
RHH5264_R3636
199.0
RHH5207_R3578
359.2
RHH5299_R3665
221.9
T-reg nTPM: 34.0
Samples: 4
Max nTPM: 42.9
Min nTPM: 27.7
RHH5301_R3667
29.3
RHH5237_R3609
42.9
RHH5266_R3638
36.0
RHH5209_R3580
27.7
Terminal effector memory CD4 T-cell nTPM: 393.1
Samples: 2
Max nTPM: 453.0
Min nTPM: 333.1
RHH5243_R3615
453.0
RHH5272_R3644
333.1
Terminal effector memory CD8 T-cell nTPM: 330.0
Samples: 4
Max nTPM: 460.3
Min nTPM: 251.3
RHH5232_R3604
460.3
RHH5204_R3575
307.5
RHH5261_R3633
251.3
RHH5296_R3662
300.9
Vd2 gdTCR nTPM: 269.5
Samples: 4
Max nTPM: 407.2
Min nTPM: 191.4
RHH5234_R3606
210.0
RHH5206_R3577
407.2
RHH5263_R3635
269.2
RHH5298_R3664
191.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
