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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.8
nTPM
Monaco:
289.7
nTPM
Schmiedel:
260.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.8
HPA sample
nTPM
gdT-cell nTPM: 70.6
Samples: 6
Max nTPM: 87.3
Min nTPM: 53.9
P10809_1007
54.3
P10809_1022
78.2
P10809_1041
87.3
P10809_1060
65.4
P10809_1077
84.3
P10809_1098
53.9
MAIT T-cell nTPM: 51.9
Samples: 6
Max nTPM: 69.2
Min nTPM: 42.2
P10809_1006
42.2
P10809_1024
52.7
P10809_1043
49.1
P10809_1062
46.0
P10809_1083
51.9
P10809_1097
69.2
Memory CD4 T-cell nTPM: 56.4
Samples: 6
Max nTPM: 76.2
Min nTPM: 43.0
P10809_1014
45.8
P10809_1026
47.8
P10809_1045
59.6
P10809_1064
66.1
P10809_1086
76.2
P10809_1113
43.0
Memory CD8 T-cell nTPM: 74.8
Samples: 5
Max nTPM: 89.6
Min nTPM: 65.9
P10809_1012
67.3
P10809_1027
65.9
P10809_1046
79.3
P10809_1065
89.6
P10809_1111
71.8
Naive CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 42.3
Min nTPM: 26.5
P10809_1015
33.4
P10809_1030
29.1
P10809_1049
30.2
P10809_1068
34.4
P10809_1085
42.3
P10809_1112
26.5
Naive CD8 T-cell nTPM: 59.8
Samples: 6
Max nTPM: 94.3
Min nTPM: 32.5
P10809_1016
35.6
P10809_1031
60.5
P10809_1050
62.9
P10809_1069
73.2
P10809_1087
94.3
P10809_1110
32.5
T-reg nTPM: 68.6
Samples: 6
Max nTPM: 91.1
Min nTPM: 48.8
P10809_1018
76.9
P10809_1037
71.9
P10809_1056
53.9
P10809_1075
91.1
P10809_1094
68.9
P10809_1106
48.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
289.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 144.3
Samples: 4
Max nTPM: 166.1
Min nTPM: 104.4
RHH5202_R3573
166.1
RHH5230_R3602
153.4
RHH5259_R3631
104.4
RHH5288_R3660
153.4
Effector memory CD8 T-cell nTPM: 289.7
Samples: 4
Max nTPM: 372.2
Min nTPM: 166.9
RHH5203_R3574
372.2
RHH5231_R3603
335.5
RHH5260_R3632
166.9
RHH5289_R3661
284.2
MAIT T-cell nTPM: 147.3
Samples: 4
Max nTPM: 163.1
Min nTPM: 125.9
RHH5233_R3605
163.1
RHH5205_R3576
138.8
RHH5262_R3634
125.9
RHH5297_R3663
161.2
Memory CD4 T-cell TFH nTPM: 128.3
Samples: 4
Max nTPM: 157.2
Min nTPM: 101.7
RHH5300_R3666
101.7
RHH5236_R3608
138.7
RHH5265_R3637
115.5
RHH5208_R3579
157.2
Memory CD4 T-cell Th1 nTPM: 135.8
Samples: 4
Max nTPM: 177.8
Min nTPM: 94.6
RHH5210_R3581
177.8
RHH5302_R3668
164.9
RHH5238_R3610
106.0
RHH5267_R3639
94.6
Memory CD4 T-cell Th1/Th17 nTPM: 130.9
Samples: 4
Max nTPM: 153.0
Min nTPM: 101.7
RHH5303_R3669
153.0
RHH5211_R3582
152.2
RHH5239_R3611
116.7
RHH5268_R3640
101.7
Memory CD4 T-cell Th17 nTPM: 122.4
Samples: 4
Max nTPM: 157.3
Min nTPM: 95.0
RHH5304_R3670
132.0
RHH5212_R3583
157.3
RHH5240_R3612
105.2
RHH5269_R3641
95.0
Memory CD4 T-cell Th2 nTPM: 145.2
Samples: 4
Max nTPM: 159.5
Min nTPM: 123.9
RHH5305_R3671
141.3
RHH5213_R3584
159.5
RHH5241_R3613
156.1
RHH5270_R3642
123.9
Naive CD4 T-cell nTPM: 80.5
Samples: 4
Max nTPM: 93.4
Min nTPM: 53.6
RHH5306_R3672
53.6
RHH5214_R3585
90.9
RHH5242_R3614
93.4
RHH5271_R3643
84.2
Naive CD8 T-cell nTPM: 77.1
Samples: 4
Max nTPM: 111.8
Min nTPM: 47.6
RHH5201_R3572
111.8
RHH5229_R3601
47.6
RHH5258_R3630
76.4
RHH5287_R3659
72.4
Non-Vd2 gdTCR nTPM: 272.7
Samples: 4
Max nTPM: 404.3
Min nTPM: 198.0
RHH5235_R3607
198.0
RHH5264_R3636
248.8
RHH5207_R3578
404.3
RHH5299_R3665
239.7
T-reg nTPM: 109.6
Samples: 4
Max nTPM: 140.1
Min nTPM: 86.2
RHH5301_R3667
105.4
RHH5237_R3609
140.1
RHH5266_R3638
86.2
RHH5209_R3580
106.8
Terminal effector memory CD4 T-cell nTPM: 229.4
Samples: 2
Max nTPM: 237.0
Min nTPM: 221.7
RHH5243_R3615
221.7
RHH5272_R3644
237.0
Terminal effector memory CD8 T-cell nTPM: 278.1
Samples: 4
Max nTPM: 319.6
Min nTPM: 196.7
RHH5232_R3604
310.8
RHH5204_R3575
319.6
RHH5261_R3633
196.7
RHH5296_R3662
285.1
Vd2 gdTCR nTPM: 214.2
Samples: 4
Max nTPM: 354.9
Min nTPM: 130.8
RHH5234_R3606
222.6
RHH5206_R3577
354.9
RHH5263_R3635
148.4
RHH5298_R3664
130.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
