HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:58.2 nTPM
GTEx:19.0 nTPM
FANTOM5:69.9 Scaled Tags Per Million
Pig:91.8 nTPM
Mouse:110.4 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041942Antibody HPA044198
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1898 Male, age 80, left hemisphere 48.7
2621 Female, age 67, right hemisphere 34.9
2529 Female, age 94, left hemisphere 28.4
1911 Female, age 85, right hemisphere 26.4
2148 Female, age 91, left hemisphere 25.3
1855 Male, age 76, left hemisphere 20.5
Dentate gyrus
nTPM: 30.0
1927 Female, age 91, both hemispheres 42.1
2530 Female, age 94, left hemisphere 30.9
2528 Male, age 74, both hemispheres 29.7
2246 Female, age 85, both hemispheres 26.8
2531 Female, age 67, both hemispheres 26.3
2010 Male, age 76, both hemispheres 24.3
Entorhinal gyrus
nTPM: 40.7
2764 Male, age 80, right hemisphere 50.4
2613 Female, age 94, left hemisphere 45.6
1938 Female, age 85, left hemisphere 45.4
1787 Male, age 76, left hemisphere 41.3
2686 Male, age 75, right hemisphere 33.8
2117 Female, age 91, right hemisphere 27.5
Hippocampus, CA1
nTPM: 38.0
2749 Male, age 80, left hemisphere 69.7
2527 Male, age 74, both hemispheres 35.7
2082 Female, age 91, right hemisphere 35.5
1873 Female, age 85, both hemispheres 31.2
2045 Male, age 76, both hemispheres 17.8
Hippocampus, CA2
nTPM: 38.7
2437 Female, age 94, left hemisphere 44.5
1892 Male, age 76, both hemispheres 41.0
1963 Male, age 80, left hemisphere 38.3
2249 Male, age 74, both hemispheres 38.3
2113 Female, age 91, right hemisphere 37.3
1940 Female, age 85, left hemisphere 32.9
Hippocampus, CA3
nTPM: 37.1
2137 Male, age 80, left hemisphere 60.0
2436 Male, age 74, both hemispheres 41.0
1867 Male, age 76, both hemispheres 35.5
2861 Female, age 67, both hemispheres 30.1
1891 Female, age 85, both hemispheres 29.4
2620 Female, age 94, left hemisphere 26.8
Parahippocampal cortex
nTPM: 45.4
1990 Female, age 91, right hemisphere 55.1
1850 Male, age 80, both hemispheres 55.0
2693 Female, age 94, both hemispheres 54.2
2250 Female, age 67, right hemisphere 50.1
2245 Female, age 91, both hemispheres 49.6
1933 Female, age 85, both hemispheres 47.7
2532 Female, age 72, left hemisphere 40.1
2622 Female, age 67, right hemisphere 39.4
2018 Male, age 76, both hemispheres 31.3
2692 Male, age 74, both hemispheres 30.9
Perirhinal gyrus
nTPM: 58.2
1847 Female, age 91, left hemisphere 73.5
1794 Male, age 80, right hemisphere 64.4
2521 Female, age 94, right hemisphere 58.9
1841 Female, age 85, right hemisphere 55.7
2848 Male, age 76, right hemisphere 38.4
Subiculum
nTPM: 34.6
1977 Female, age 85, both hemispheres 45.2
1901 Male, age 80, both hemispheres 43.5
2619 Male, age 74, both hemispheres 38.8
2438 Female, age 94, left hemisphere 34.4
2729 Female, age 91, right hemisphere 24.2
2042 Male, age 76, both hemispheres 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 52.5
Min nTPM: 4.6
Std nTPM: 8.9
Median nTPM: 17.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 52.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 50.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 43.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 42.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 40.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 38.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 37.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 37.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 36.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.9
FF:10169-103B7 60 years, female 79.9
FF:10153-102I9 76 years, female 59.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.8
Pig sample Sample description nTPM
Subiculum
nTPM: 91.8
Samples: 4

Max nTPM: 106.0
Min nTPM: 79.0
Sample A Female 106.0
Sample B Female 88.2
Sample C Male 93.9
Sample D Male 79.0
Dorsal hippocampus
nTPM: 71.4
Samples: 4

Max nTPM: 79.2
Min nTPM: 57.2
Sample A Female 75.3
Sample B Female 79.2
Sample C Male 57.2
Sample D Male 74.0
Entorhinal cortex
nTPM: 87.9
Samples: 4

Max nTPM: 93.7
Min nTPM: 75.6
Sample A Female 92.9
Sample B Female 89.3
Sample C Male 93.7
Sample D Male 75.6
Ventral hippocampus
nTPM: 73.5
Samples: 4

Max nTPM: 79.9
Min nTPM: 66.2
Sample A Female 69.5
Sample B Female 66.2
Sample C Male 79.9
Sample D Male 78.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.4
Samples: 4

Max nTPM: 119.6
Min nTPM: 105.4
Sample A Male 106.7
Sample B Male 119.6
Sample C Female 105.4
Sample D Female 109.7
Hippocampal formation
nTPM: 109.4
Samples: 4

Max nTPM: 117.1
Min nTPM: 105.6
Sample A Male 117.1
Sample B Male 105.6
Sample C Female 107.4
Sample D Female 107.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
1457 Antisense, RP_040428_01_G03, Mouse strain C57BL/6J (56 days, male) 3.0
1456 Antisense, RP_040428_01_G03, Mouse strain C57BL/6J (56 days, male) 1.9

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