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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
225.4
nTPM
Monaco:
102.3
nTPM
Schmiedel:
58.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.4
HPA sample
nTPM
gdT-cell nTPM: 107.5
Samples: 6
Max nTPM: 128.8
Min nTPM: 82.7
P10809_1007
82.7
P10809_1022
118.5
P10809_1041
112.7
P10809_1060
109.6
P10809_1077
128.8
P10809_1098
92.6
MAIT T-cell nTPM: 104.2
Samples: 6
Max nTPM: 130.0
Min nTPM: 87.2
P10809_1006
87.2
P10809_1024
130.0
P10809_1043
104.4
P10809_1062
108.9
P10809_1083
90.6
P10809_1097
103.9
Memory CD4 T-cell nTPM: 123.1
Samples: 6
Max nTPM: 143.9
Min nTPM: 92.1
P10809_1014
92.1
P10809_1026
143.0
P10809_1045
139.7
P10809_1064
143.9
P10809_1086
108.8
P10809_1113
110.8
Memory CD8 T-cell nTPM: 112.5
Samples: 5
Max nTPM: 137.0
Min nTPM: 91.1
P10809_1012
96.4
P10809_1027
91.1
P10809_1046
137.0
P10809_1065
129.8
P10809_1111
108.2
Naive CD4 T-cell nTPM: 105.0
Samples: 6
Max nTPM: 154.5
Min nTPM: 63.5
P10809_1015
63.5
P10809_1030
86.7
P10809_1049
154.5
P10809_1068
119.4
P10809_1085
107.2
P10809_1112
98.8
Naive CD8 T-cell nTPM: 103.4
Samples: 6
Max nTPM: 140.5
Min nTPM: 74.1
P10809_1016
74.1
P10809_1031
116.0
P10809_1050
106.3
P10809_1069
140.5
P10809_1087
105.9
P10809_1110
77.3
T-reg nTPM: 225.4
Samples: 6
Max nTPM: 297.6
Min nTPM: 172.8
P10809_1018
172.8
P10809_1037
201.1
P10809_1056
297.6
P10809_1075
187.2
P10809_1094
202.4
P10809_1106
291.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.3
Samples: 4
Max nTPM: 113.4
Min nTPM: 47.0
RHH5202_R3573
55.5
RHH5230_R3602
49.4
RHH5259_R3631
47.0
RHH5288_R3660
113.4
Effector memory CD8 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 106.9
Min nTPM: 49.4
RHH5203_R3574
95.0
RHH5231_R3603
106.9
RHH5260_R3632
49.4
RHH5289_R3661
54.2
MAIT T-cell nTPM: 60.2
Samples: 4
Max nTPM: 80.0
Min nTPM: 28.7
RHH5233_R3605
78.4
RHH5205_R3576
28.7
RHH5262_R3634
53.7
RHH5297_R3663
80.0
Memory CD4 T-cell TFH nTPM: 102.3
Samples: 4
Max nTPM: 174.3
Min nTPM: 70.0
RHH5300_R3666
70.0
RHH5236_R3608
174.3
RHH5265_R3637
70.8
RHH5208_R3579
94.1
Memory CD4 T-cell Th1 nTPM: 75.4
Samples: 4
Max nTPM: 104.0
Min nTPM: 45.8
RHH5210_R3581
87.9
RHH5302_R3668
104.0
RHH5238_R3610
63.9
RHH5267_R3639
45.8
Memory CD4 T-cell Th1/Th17 nTPM: 70.0
Samples: 4
Max nTPM: 110.2
Min nTPM: 28.3
RHH5303_R3669
110.2
RHH5211_R3582
85.7
RHH5239_R3611
28.3
RHH5268_R3640
55.8
Memory CD4 T-cell Th17 nTPM: 63.2
Samples: 4
Max nTPM: 102.5
Min nTPM: 32.7
RHH5304_R3670
55.9
RHH5212_R3583
102.5
RHH5240_R3612
61.8
RHH5269_R3641
32.7
Memory CD4 T-cell Th2 nTPM: 68.7
Samples: 4
Max nTPM: 81.5
Min nTPM: 58.7
RHH5305_R3671
67.7
RHH5213_R3584
58.7
RHH5241_R3613
81.5
RHH5270_R3642
66.7
Naive CD4 T-cell nTPM: 59.8
Samples: 4
Max nTPM: 94.7
Min nTPM: 35.9
RHH5306_R3672
63.9
RHH5214_R3585
94.7
RHH5242_R3614
35.9
RHH5271_R3643
44.5
Naive CD8 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 79.7
Min nTPM: 23.4
RHH5201_R3572
79.7
RHH5229_R3601
23.4
RHH5258_R3630
73.1
RHH5287_R3659
39.0
Non-Vd2 gdTCR nTPM: 92.6
Samples: 4
Max nTPM: 133.3
Min nTPM: 54.3
RHH5235_R3607
54.3
RHH5264_R3636
93.5
RHH5207_R3578
89.4
RHH5299_R3665
133.3
T-reg nTPM: 85.1
Samples: 4
Max nTPM: 112.5
Min nTPM: 48.7
RHH5301_R3667
112.5
RHH5237_R3609
109.4
RHH5266_R3638
48.7
RHH5209_R3580
69.7
Terminal effector memory CD4 T-cell nTPM: 63.4
Samples: 2
Max nTPM: 85.5
Min nTPM: 41.3
RHH5243_R3615
41.3
RHH5272_R3644
85.5
Terminal effector memory CD8 T-cell nTPM: 101.9
Samples: 4
Max nTPM: 143.5
Min nTPM: 60.8
RHH5232_R3604
101.3
RHH5204_R3575
143.5
RHH5261_R3633
60.8
RHH5296_R3662
102.1
Vd2 gdTCR nTPM: 83.4
Samples: 4
Max nTPM: 125.0
Min nTPM: 44.6
RHH5234_R3606
67.1
RHH5206_R3577
125.0
RHH5263_R3635
44.6
RHH5298_R3664
96.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
