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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
232.0
nTPM
Monaco:
324.1
nTPM
Schmiedel:
105.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
232.0
HPA sample
nTPM
gdT-cell nTPM: 76.4
Samples: 6
Max nTPM: 103.2
Min nTPM: 50.7
P10809_1007
50.7
P10809_1022
68.8
P10809_1041
103.2
P10809_1060
74.1
P10809_1077
62.4
P10809_1098
99.3
MAIT T-cell nTPM: 97.8
Samples: 6
Max nTPM: 117.4
Min nTPM: 83.2
P10809_1006
84.2
P10809_1024
92.7
P10809_1043
107.2
P10809_1062
83.2
P10809_1083
102.1
P10809_1097
117.4
Memory CD4 T-cell nTPM: 73.7
Samples: 6
Max nTPM: 81.2
Min nTPM: 67.6
P10809_1014
69.8
P10809_1026
71.1
P10809_1045
81.2
P10809_1064
67.6
P10809_1086
79.2
P10809_1113
73.2
Memory CD8 T-cell nTPM: 139.5
Samples: 5
Max nTPM: 231.0
Min nTPM: 85.5
P10809_1012
94.8
P10809_1027
148.7
P10809_1046
137.4
P10809_1065
85.5
P10809_1111
231.0
Naive CD4 T-cell nTPM: 213.0
Samples: 6
Max nTPM: 273.0
Min nTPM: 165.2
P10809_1015
213.5
P10809_1030
199.1
P10809_1049
273.0
P10809_1068
165.2
P10809_1085
209.0
P10809_1112
218.4
Naive CD8 T-cell nTPM: 232.0
Samples: 6
Max nTPM: 302.9
Min nTPM: 110.2
P10809_1016
294.6
P10809_1031
252.0
P10809_1050
272.6
P10809_1069
159.5
P10809_1087
110.2
P10809_1110
302.9
T-reg nTPM: 35.2
Samples: 6
Max nTPM: 54.5
Min nTPM: 23.0
P10809_1018
25.9
P10809_1037
34.0
P10809_1056
39.3
P10809_1075
34.3
P10809_1094
23.0
P10809_1106
54.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
324.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.7
Samples: 4
Max nTPM: 189.3
Min nTPM: 114.2
RHH5202_R3573
167.8
RHH5230_R3602
115.6
RHH5259_R3631
114.2
RHH5288_R3660
189.3
Effector memory CD8 T-cell nTPM: 136.7
Samples: 4
Max nTPM: 178.4
Min nTPM: 104.8
RHH5203_R3574
108.0
RHH5231_R3603
155.6
RHH5260_R3632
178.4
RHH5289_R3661
104.8
MAIT T-cell nTPM: 117.6
Samples: 4
Max nTPM: 143.6
Min nTPM: 82.1
RHH5233_R3605
134.2
RHH5205_R3576
82.1
RHH5262_R3634
143.6
RHH5297_R3663
110.6
Memory CD4 T-cell TFH nTPM: 136.2
Samples: 4
Max nTPM: 155.4
Min nTPM: 126.9
RHH5300_R3666
131.0
RHH5236_R3608
155.4
RHH5265_R3637
126.9
RHH5208_R3579
131.5
Memory CD4 T-cell Th1 nTPM: 114.3
Samples: 4
Max nTPM: 164.7
Min nTPM: 82.5
RHH5210_R3581
164.7
RHH5302_R3668
108.1
RHH5238_R3610
82.5
RHH5267_R3639
101.9
Memory CD4 T-cell Th1/Th17 nTPM: 96.5
Samples: 4
Max nTPM: 121.1
Min nTPM: 66.1
RHH5303_R3669
121.1
RHH5211_R3582
112.8
RHH5239_R3611
66.1
RHH5268_R3640
85.8
Memory CD4 T-cell Th17 nTPM: 76.9
Samples: 4
Max nTPM: 108.3
Min nTPM: 65.5
RHH5304_R3670
65.7
RHH5212_R3583
108.3
RHH5240_R3612
65.5
RHH5269_R3641
68.1
Memory CD4 T-cell Th2 nTPM: 67.3
Samples: 4
Max nTPM: 88.6
Min nTPM: 47.2
RHH5305_R3671
88.6
RHH5213_R3584
81.7
RHH5241_R3613
51.6
RHH5270_R3642
47.2
Naive CD4 T-cell nTPM: 269.5
Samples: 4
Max nTPM: 320.1
Min nTPM: 213.1
RHH5306_R3672
288.2
RHH5214_R3585
320.1
RHH5242_R3614
213.1
RHH5271_R3643
256.6
Naive CD8 T-cell nTPM: 324.1
Samples: 4
Max nTPM: 371.1
Min nTPM: 283.6
RHH5201_R3572
329.8
RHH5229_R3601
283.6
RHH5258_R3630
312.0
RHH5287_R3659
371.1
Non-Vd2 gdTCR nTPM: 121.1
Samples: 4
Max nTPM: 214.7
Min nTPM: 60.8
RHH5235_R3607
104.3
RHH5264_R3636
214.7
RHH5207_R3578
60.8
RHH5299_R3665
104.4
T-reg nTPM: 92.3
Samples: 4
Max nTPM: 99.0
Min nTPM: 85.3
RHH5301_R3667
99.0
RHH5237_R3609
85.3
RHH5266_R3638
96.2
RHH5209_R3580
88.5
Terminal effector memory CD4 T-cell nTPM: 140.1
Samples: 2
Max nTPM: 190.7
Min nTPM: 89.4
RHH5243_R3615
89.4
RHH5272_R3644
190.7
Terminal effector memory CD8 T-cell nTPM: 181.0
Samples: 4
Max nTPM: 194.6
Min nTPM: 162.4
RHH5232_R3604
192.7
RHH5204_R3575
162.4
RHH5261_R3633
194.6
RHH5296_R3662
174.4
Vd2 gdTCR nTPM: 100.4
Samples: 4
Max nTPM: 159.3
Min nTPM: 64.5
RHH5234_R3606
92.7
RHH5206_R3577
64.5
RHH5263_R3635
159.3
RHH5298_R3664
85.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
