HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:4.6 nTPM
HPA Brain:20.8 nTPM
GTEx:4.6 nTPM
FANTOM5:42.9 Scaled Tags Per Million
Pig:36.3 nTPM
Mouse:28.6 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060837
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.3
1898 Male, age 80, left hemisphere 23.1
2529 Female, age 94, left hemisphere 22.2
1911 Female, age 85, right hemisphere 19.8
2621 Female, age 67, right hemisphere 19.7
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 18.5
Dentate gyrus
nTPM: 18.6
2010 Male, age 76, both hemispheres 20.7
2246 Female, age 85, both hemispheres 20.6
2528 Male, age 74, both hemispheres 18.7
1927 Female, age 91, both hemispheres 17.4
2530 Female, age 94, left hemisphere 17.4
2531 Female, age 67, both hemispheres 16.9
Entorhinal gyrus
nTPM: 18.8
2117 Female, age 91, right hemisphere 20.2
1938 Female, age 85, left hemisphere 20.0
2764 Male, age 80, right hemisphere 20.0
2686 Male, age 75, right hemisphere 18.6
1787 Male, age 76, left hemisphere 17.3
2613 Female, age 94, left hemisphere 16.8
Hippocampus, CA1
nTPM: 20.4
2749 Male, age 80, left hemisphere 26.2
2527 Male, age 74, both hemispheres 20.0
2045 Male, age 76, both hemispheres 19.6
1873 Female, age 85, both hemispheres 18.4
2082 Female, age 91, right hemisphere 18.0
Hippocampus, CA2
nTPM: 18.2
1963 Male, age 80, left hemisphere 20.5
2249 Male, age 74, both hemispheres 20.1
1892 Male, age 76, both hemispheres 19.9
1940 Female, age 85, left hemisphere 17.4
2437 Female, age 94, left hemisphere 16.6
2113 Female, age 91, right hemisphere 14.9
Hippocampus, CA3
nTPM: 20.2
2436 Male, age 74, both hemispheres 21.7
2137 Male, age 80, left hemisphere 20.5
1867 Male, age 76, both hemispheres 20.3
2620 Female, age 94, left hemisphere 19.9
1891 Female, age 85, both hemispheres 19.4
2861 Female, age 67, both hemispheres 19.1
Parahippocampal cortex
nTPM: 19.3
2245 Female, age 91, both hemispheres 21.6
1850 Male, age 80, both hemispheres 21.4
1933 Female, age 85, both hemispheres 20.9
2532 Female, age 72, left hemisphere 19.4
2692 Male, age 74, both hemispheres 19.2
1990 Female, age 91, right hemisphere 19.0
2018 Male, age 76, both hemispheres 18.6
2693 Female, age 94, both hemispheres 17.9
2250 Female, age 67, right hemisphere 17.5
2622 Female, age 67, right hemisphere 17.3
Perirhinal gyrus
nTPM: 20.8
1847 Female, age 91, left hemisphere 22.5
1841 Female, age 85, right hemisphere 22.3
1794 Male, age 80, right hemisphere 20.2
2521 Female, age 94, right hemisphere 19.7
2848 Male, age 76, right hemisphere 19.6
Subiculum
nTPM: 19.9
2438 Female, age 94, left hemisphere 21.6
1977 Female, age 85, both hemispheres 21.1
1901 Male, age 80, both hemispheres 19.8
2729 Female, age 91, right hemisphere 19.6
2042 Male, age 76, both hemispheres 19.4
2619 Male, age 74, both hemispheres 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.6
Samples: 197

Max nTPM: 8.9
Min nTPM: 2.4
Std nTPM: 1.3
Median nTPM: 4.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 8.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 8.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 8.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 8.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 8.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 7.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 7.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 7.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 7.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 7.2
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 7.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.9
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 33.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.3
Pig sample Sample description nTPM
Subiculum
nTPM: 32.8
Samples: 4

Max nTPM: 34.7
Min nTPM: 31.6
Sample A Female 34.7
Sample B Female 32.5
Sample C Male 31.6
Sample D Male 32.5
Dorsal hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 36.7
Min nTPM: 35.5
Sample A Female 36.7
Sample B Female 36.5
Sample C Male 36.5
Sample D Male 35.5
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 36.4
Min nTPM: 31.3
Sample A Female 31.9
Sample B Female 36.4
Sample C Male 31.8
Sample D Male 31.3
Ventral hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 34.7
Min nTPM: 23.8
Sample A Female 33.2
Sample B Female 34.1
Sample C Male 23.8
Sample D Male 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.7
Samples: 4

Max nTPM: 29.1
Min nTPM: 25.9
Sample A Male 25.9
Sample B Male 28.3
Sample C Female 27.4
Sample D Female 29.1
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 31.0
Min nTPM: 25.8
Sample A Male 31.0
Sample B Male 29.0
Sample C Female 28.8
Sample D Female 25.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69838541 Antisense, RP_050309_02_D10, Mouse strain C57BL/6J (56 days, male) 1.0

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