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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
438.9
nTPM
Monaco:
1293.9
nTPM
Schmiedel:
2103.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
438.9
HPA sample
nTPM
gdT-cell nTPM: 159.8
Samples: 6
Max nTPM: 207.9
Min nTPM: 132.9
P10809_1007
207.9
P10809_1022
144.6
P10809_1041
176.8
P10809_1060
138.0
P10809_1077
132.9
P10809_1098
158.3
MAIT T-cell nTPM: 349.7
Samples: 6
Max nTPM: 444.3
Min nTPM: 284.7
P10809_1006
444.3
P10809_1024
314.1
P10809_1043
318.7
P10809_1062
338.0
P10809_1083
284.7
P10809_1097
398.2
Memory CD4 T-cell nTPM: 334.1
Samples: 6
Max nTPM: 487.2
Min nTPM: 224.5
P10809_1014
487.2
P10809_1026
393.6
P10809_1045
363.3
P10809_1064
249.7
P10809_1086
224.5
P10809_1113
286.4
Memory CD8 T-cell nTPM: 264.4
Samples: 5
Max nTPM: 366.1
Min nTPM: 214.3
P10809_1012
366.1
P10809_1027
256.9
P10809_1046
233.3
P10809_1065
214.3
P10809_1111
251.3
Naive CD4 T-cell nTPM: 438.9
Samples: 6
Max nTPM: 575.1
Min nTPM: 329.4
P10809_1015
575.1
P10809_1030
492.2
P10809_1049
498.9
P10809_1068
363.6
P10809_1085
374.2
P10809_1112
329.4
Naive CD8 T-cell nTPM: 371.7
Samples: 6
Max nTPM: 588.1
Min nTPM: 160.2
P10809_1016
588.1
P10809_1031
511.5
P10809_1050
376.5
P10809_1069
271.7
P10809_1087
160.2
P10809_1110
322.4
T-reg nTPM: 302.4
Samples: 6
Max nTPM: 369.7
Min nTPM: 229.9
P10809_1018
369.7
P10809_1037
287.0
P10809_1056
359.4
P10809_1075
229.9
P10809_1094
290.6
P10809_1106
277.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1293.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 908.6
Samples: 4
Max nTPM: 1237.0
Min nTPM: 726.9
RHH5202_R3573
885.0
RHH5230_R3602
1237.0
RHH5259_R3631
785.3
RHH5288_R3660
726.9
Effector memory CD8 T-cell nTPM: 633.3
Samples: 4
Max nTPM: 720.9
Min nTPM: 542.1
RHH5203_R3574
644.6
RHH5231_R3603
625.7
RHH5260_R3632
720.9
RHH5289_R3661
542.1
MAIT T-cell nTPM: 841.6
Samples: 4
Max nTPM: 925.4
Min nTPM: 743.1
RHH5233_R3605
837.2
RHH5205_R3576
860.8
RHH5262_R3634
925.4
RHH5297_R3663
743.1
Memory CD4 T-cell TFH nTPM: 1026.8
Samples: 4
Max nTPM: 1317.2
Min nTPM: 784.5
RHH5300_R3666
784.5
RHH5236_R3608
1317.2
RHH5265_R3637
857.0
RHH5208_R3579
1148.3
Memory CD4 T-cell Th1 nTPM: 938.5
Samples: 4
Max nTPM: 1001.1
Min nTPM: 828.4
RHH5210_R3581
828.4
RHH5302_R3668
976.1
RHH5238_R3610
948.2
RHH5267_R3639
1001.1
Memory CD4 T-cell Th1/Th17 nTPM: 1075.2
Samples: 4
Max nTPM: 1248.1
Min nTPM: 890.3
RHH5303_R3669
1088.5
RHH5211_R3582
890.3
RHH5239_R3611
1248.1
RHH5268_R3640
1073.7
Memory CD4 T-cell Th17 nTPM: 1191.5
Samples: 4
Max nTPM: 1540.0
Min nTPM: 1002.7
RHH5304_R3670
1208.9
RHH5212_R3583
1014.4
RHH5240_R3612
1540.0
RHH5269_R3641
1002.7
Memory CD4 T-cell Th2 nTPM: 983.9
Samples: 4
Max nTPM: 1149.1
Min nTPM: 889.9
RHH5305_R3671
889.9
RHH5213_R3584
900.9
RHH5241_R3613
1149.1
RHH5270_R3642
995.5
Naive CD4 T-cell nTPM: 1293.9
Samples: 4
Max nTPM: 1457.2
Min nTPM: 1099.9
RHH5306_R3672
1457.2
RHH5214_R3585
1099.9
RHH5242_R3614
1307.5
RHH5271_R3643
1311.1
Naive CD8 T-cell nTPM: 1245.6
Samples: 4
Max nTPM: 1300.4
Min nTPM: 1139.1
RHH5201_R3572
1291.9
RHH5229_R3601
1300.4
RHH5258_R3630
1139.1
RHH5287_R3659
1251.1
Non-Vd2 gdTCR nTPM: 615.7
Samples: 4
Max nTPM: 737.3
Min nTPM: 443.0
RHH5235_R3607
737.3
RHH5264_R3636
677.4
RHH5207_R3578
605.0
RHH5299_R3665
443.0
T-reg nTPM: 1036.8
Samples: 4
Max nTPM: 1204.4
Min nTPM: 926.5
RHH5301_R3667
952.9
RHH5237_R3609
1204.4
RHH5266_R3638
1063.5
RHH5209_R3580
926.5
Terminal effector memory CD4 T-cell nTPM: 647.4
Samples: 2
Max nTPM: 721.2
Min nTPM: 573.5
RHH5243_R3615
721.2
RHH5272_R3644
573.5
Terminal effector memory CD8 T-cell nTPM: 526.4
Samples: 4
Max nTPM: 650.0
Min nTPM: 443.1
RHH5232_R3604
562.3
RHH5204_R3575
450.1
RHH5261_R3633
650.0
RHH5296_R3662
443.1
Vd2 gdTCR nTPM: 760.8
Samples: 4
Max nTPM: 976.4
Min nTPM: 623.9
RHH5234_R3606
776.6
RHH5206_R3577
623.9
RHH5263_R3635
976.4
RHH5298_R3664
666.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.