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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.1
nTPM
Monaco:
61.7
nTPM
Schmiedel:
52.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.1
HPA sample
nTPM
gdT-cell nTPM: 46.6
Samples: 6
Max nTPM: 55.3
Min nTPM: 26.4
P10809_1007
26.4
P10809_1022
45.6
P10809_1041
54.3
P10809_1060
44.5
P10809_1077
53.2
P10809_1098
55.3
MAIT T-cell nTPM: 45.6
Samples: 6
Max nTPM: 58.6
Min nTPM: 27.0
P10809_1006
27.0
P10809_1024
50.6
P10809_1043
46.9
P10809_1062
52.1
P10809_1083
38.5
P10809_1097
58.6
Memory CD4 T-cell nTPM: 48.2
Samples: 6
Max nTPM: 57.2
Min nTPM: 33.5
P10809_1014
33.5
P10809_1026
50.1
P10809_1045
57.2
P10809_1064
50.5
P10809_1086
45.9
P10809_1113
52.0
Memory CD8 T-cell nTPM: 49.6
Samples: 5
Max nTPM: 62.4
Min nTPM: 36.8
P10809_1012
36.8
P10809_1027
62.4
P10809_1046
53.7
P10809_1065
46.5
P10809_1111
48.8
Naive CD4 T-cell nTPM: 64.2
Samples: 6
Max nTPM: 87.3
Min nTPM: 36.2
P10809_1015
36.2
P10809_1030
72.2
P10809_1049
87.3
P10809_1068
64.9
P10809_1085
65.9
P10809_1112
58.6
Naive CD8 T-cell nTPM: 54.4
Samples: 6
Max nTPM: 63.3
Min nTPM: 41.0
P10809_1016
41.0
P10809_1031
62.9
P10809_1050
56.5
P10809_1069
63.3
P10809_1087
41.2
P10809_1110
61.6
T-reg nTPM: 95.1
Samples: 6
Max nTPM: 125.5
Min nTPM: 46.4
P10809_1018
46.4
P10809_1037
100.4
P10809_1056
125.5
P10809_1075
86.4
P10809_1094
123.8
P10809_1106
88.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.4
Samples: 4
Max nTPM: 77.3
Min nTPM: 32.2
RHH5202_R3573
77.3
RHH5230_R3602
36.1
RHH5259_R3631
32.2
RHH5288_R3660
75.9
Effector memory CD8 T-cell nTPM: 45.1
Samples: 4
Max nTPM: 63.1
Min nTPM: 26.6
RHH5203_R3574
63.1
RHH5231_R3603
39.3
RHH5260_R3632
26.6
RHH5289_R3661
51.2
MAIT T-cell nTPM: 41.6
Samples: 4
Max nTPM: 52.5
Min nTPM: 26.6
RHH5233_R3605
52.5
RHH5205_R3576
26.6
RHH5262_R3634
37.4
RHH5297_R3663
49.9
Memory CD4 T-cell TFH nTPM: 61.2
Samples: 4
Max nTPM: 69.5
Min nTPM: 52.5
RHH5300_R3666
69.5
RHH5236_R3608
52.5
RHH5265_R3637
56.1
RHH5208_R3579
66.8
Memory CD4 T-cell Th1 nTPM: 39.0
Samples: 4
Max nTPM: 61.4
Min nTPM: 26.0
RHH5210_R3581
26.0
RHH5302_R3668
61.4
RHH5238_R3610
29.3
RHH5267_R3639
39.2
Memory CD4 T-cell Th1/Th17 nTPM: 45.0
Samples: 4
Max nTPM: 72.0
Min nTPM: 20.8
RHH5303_R3669
58.7
RHH5211_R3582
72.0
RHH5239_R3611
28.5
RHH5268_R3640
20.8
Memory CD4 T-cell Th17 nTPM: 43.7
Samples: 4
Max nTPM: 66.2
Min nTPM: 29.4
RHH5304_R3670
44.0
RHH5212_R3583
66.2
RHH5240_R3612
29.4
RHH5269_R3641
35.2
Memory CD4 T-cell Th2 nTPM: 54.6
Samples: 4
Max nTPM: 60.7
Min nTPM: 45.5
RHH5305_R3671
45.5
RHH5213_R3584
60.7
RHH5241_R3613
59.2
RHH5270_R3642
52.8
Naive CD4 T-cell nTPM: 48.0
Samples: 4
Max nTPM: 59.0
Min nTPM: 38.1
RHH5306_R3672
59.0
RHH5214_R3585
44.9
RHH5242_R3614
49.8
RHH5271_R3643
38.1
Naive CD8 T-cell nTPM: 42.2
Samples: 4
Max nTPM: 79.0
Min nTPM: 5.6
RHH5201_R3572
79.0
RHH5229_R3601
5.6
RHH5258_R3630
47.8
RHH5287_R3659
36.5
Non-Vd2 gdTCR nTPM: 51.0
Samples: 4
Max nTPM: 62.5
Min nTPM: 36.7
RHH5235_R3607
36.7
RHH5264_R3636
62.5
RHH5207_R3578
57.6
RHH5299_R3665
47.0
T-reg nTPM: 55.9
Samples: 4
Max nTPM: 74.1
Min nTPM: 40.1
RHH5301_R3667
74.1
RHH5237_R3609
59.2
RHH5266_R3638
40.1
RHH5209_R3580
50.1
Terminal effector memory CD4 T-cell nTPM: 36.8
Samples: 2
Max nTPM: 56.9
Min nTPM: 16.7
RHH5243_R3615
16.7
RHH5272_R3644
56.9
Terminal effector memory CD8 T-cell nTPM: 61.7
Samples: 4
Max nTPM: 76.4
Min nTPM: 36.6
RHH5232_R3604
60.5
RHH5204_R3575
73.2
RHH5261_R3633
36.6
RHH5296_R3662
76.4
Vd2 gdTCR nTPM: 40.7
Samples: 4
Max nTPM: 49.4
Min nTPM: 36.5
RHH5234_R3606
36.5
RHH5206_R3577
39.9
RHH5263_R3635
37.1
RHH5298_R3664
49.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
