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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.6
nTPM
Monaco:
277.3
nTPM
Schmiedel:
129.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.6
HPA sample
nTPM
gdT-cell nTPM: 24.6
Samples: 6
Max nTPM: 29.7
Min nTPM: 16.7
P10809_1007
16.7
P10809_1022
26.0
P10809_1041
27.7
P10809_1060
29.7
P10809_1077
26.8
P10809_1098
20.4
MAIT T-cell nTPM: 32.3
Samples: 6
Max nTPM: 50.1
Min nTPM: 22.2
P10809_1006
22.2
P10809_1024
26.7
P10809_1043
32.6
P10809_1062
50.1
P10809_1083
36.8
P10809_1097
25.4
Memory CD4 T-cell nTPM: 48.2
Samples: 6
Max nTPM: 64.2
Min nTPM: 32.0
P10809_1014
32.0
P10809_1026
51.6
P10809_1045
54.3
P10809_1064
64.2
P10809_1086
43.5
P10809_1113
43.8
Memory CD8 T-cell nTPM: 33.5
Samples: 5
Max nTPM: 41.0
Min nTPM: 21.2
P10809_1012
21.2
P10809_1027
38.7
P10809_1046
33.4
P10809_1065
41.0
P10809_1111
33.1
Naive CD4 T-cell nTPM: 15.8
Samples: 6
Max nTPM: 18.6
Min nTPM: 12.9
P10809_1015
12.9
P10809_1030
15.8
P10809_1049
15.9
P10809_1068
17.1
P10809_1085
18.6
P10809_1112
14.2
Naive CD8 T-cell nTPM: 19.1
Samples: 6
Max nTPM: 23.1
Min nTPM: 16.2
P10809_1016
16.2
P10809_1031
21.2
P10809_1050
18.2
P10809_1069
23.1
P10809_1087
18.9
P10809_1110
17.0
T-reg nTPM: 80.6
Samples: 6
Max nTPM: 119.0
Min nTPM: 51.9
P10809_1018
51.9
P10809_1037
87.5
P10809_1056
100.9
P10809_1075
119.0
P10809_1094
68.2
P10809_1106
56.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
277.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 225.3
Samples: 4
Max nTPM: 268.9
Min nTPM: 190.7
RHH5202_R3573
249.5
RHH5230_R3602
191.9
RHH5259_R3631
190.7
RHH5288_R3660
268.9
Effector memory CD8 T-cell nTPM: 194.2
Samples: 4
Max nTPM: 213.5
Min nTPM: 178.0
RHH5203_R3574
202.7
RHH5231_R3603
213.5
RHH5260_R3632
178.0
RHH5289_R3661
182.5
MAIT T-cell nTPM: 162.6
Samples: 4
Max nTPM: 196.3
Min nTPM: 127.6
RHH5233_R3605
196.3
RHH5205_R3576
146.2
RHH5262_R3634
127.6
RHH5297_R3663
180.2
Memory CD4 T-cell TFH nTPM: 240.6
Samples: 4
Max nTPM: 252.8
Min nTPM: 215.8
RHH5300_R3666
215.8
RHH5236_R3608
246.0
RHH5265_R3637
247.6
RHH5208_R3579
252.8
Memory CD4 T-cell Th1 nTPM: 230.2
Samples: 4
Max nTPM: 265.7
Min nTPM: 186.5
RHH5210_R3581
186.5
RHH5302_R3668
258.7
RHH5238_R3610
265.7
RHH5267_R3639
209.9
Memory CD4 T-cell Th1/Th17 nTPM: 249.5
Samples: 4
Max nTPM: 298.0
Min nTPM: 218.4
RHH5303_R3669
260.1
RHH5211_R3582
298.0
RHH5239_R3611
221.6
RHH5268_R3640
218.4
Memory CD4 T-cell Th17 nTPM: 249.1
Samples: 4
Max nTPM: 307.5
Min nTPM: 198.3
RHH5304_R3670
225.3
RHH5212_R3583
307.5
RHH5240_R3612
265.3
RHH5269_R3641
198.3
Memory CD4 T-cell Th2 nTPM: 277.3
Samples: 4
Max nTPM: 352.9
Min nTPM: 210.8
RHH5305_R3671
272.5
RHH5213_R3584
210.8
RHH5241_R3613
352.9
RHH5270_R3642
273.1
Naive CD4 T-cell nTPM: 86.2
Samples: 4
Max nTPM: 100.1
Min nTPM: 76.5
RHH5306_R3672
76.5
RHH5214_R3585
91.4
RHH5242_R3614
100.1
RHH5271_R3643
76.6
Naive CD8 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 111.3
Min nTPM: 83.4
RHH5201_R3572
111.3
RHH5229_R3601
83.4
RHH5258_R3630
103.0
RHH5287_R3659
94.8
Non-Vd2 gdTCR nTPM: 132.2
Samples: 4
Max nTPM: 192.9
Min nTPM: 105.8
RHH5235_R3607
113.0
RHH5264_R3636
192.9
RHH5207_R3578
117.0
RHH5299_R3665
105.8
T-reg nTPM: 256.7
Samples: 4
Max nTPM: 326.9
Min nTPM: 218.1
RHH5301_R3667
256.6
RHH5237_R3609
326.9
RHH5266_R3638
225.3
RHH5209_R3580
218.1
Terminal effector memory CD4 T-cell nTPM: 194.1
Samples: 2
Max nTPM: 217.2
Min nTPM: 171.0
RHH5243_R3615
217.2
RHH5272_R3644
171.0
Terminal effector memory CD8 T-cell nTPM: 126.8
Samples: 4
Max nTPM: 135.0
Min nTPM: 117.9
RHH5232_R3604
125.0
RHH5204_R3575
135.0
RHH5261_R3633
129.1
RHH5296_R3662
117.9
Vd2 gdTCR nTPM: 166.9
Samples: 4
Max nTPM: 238.8
Min nTPM: 131.9
RHH5234_R3606
238.8
RHH5206_R3577
156.7
RHH5263_R3635
131.9
RHH5298_R3664
140.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
