HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:9.8 nTPM
HPA Brain:24.8 nTPM
GTEx:9.8 nTPM
FANTOM5:34.4 Scaled Tags Per Million
Pig:20.5 nTPM
Mouse:10.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007608
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.5
1898 Male, age 80, left hemisphere 22.2
2148 Female, age 91, left hemisphere 22.0
1911 Female, age 85, right hemisphere 21.3
2621 Female, age 67, right hemisphere 20.5
2529 Female, age 94, left hemisphere 18.6
1855 Male, age 76, left hemisphere 18.3
Dentate gyrus
nTPM: 20.2
1927 Female, age 91, both hemispheres 24.7
2246 Female, age 85, both hemispheres 20.4
2531 Female, age 67, both hemispheres 20.4
2528 Male, age 74, both hemispheres 18.6
2010 Male, age 76, both hemispheres 18.4
2530 Female, age 94, left hemisphere 18.3
Entorhinal gyrus
nTPM: 22.3
1938 Female, age 85, left hemisphere 27.5
1787 Male, age 76, left hemisphere 24.2
2117 Female, age 91, right hemisphere 23.1
2613 Female, age 94, left hemisphere 21.4
2686 Male, age 75, right hemisphere 18.9
2764 Male, age 80, right hemisphere 18.9
Hippocampus, CA1
nTPM: 20.0
2045 Male, age 76, both hemispheres 24.7
1873 Female, age 85, both hemispheres 20.0
2082 Female, age 91, right hemisphere 19.8
2527 Male, age 74, both hemispheres 19.7
2749 Male, age 80, left hemisphere 15.9
Hippocampus, CA2
nTPM: 21.3
1940 Female, age 85, left hemisphere 25.9
2437 Female, age 94, left hemisphere 23.2
2113 Female, age 91, right hemisphere 21.8
1892 Male, age 76, both hemispheres 20.6
1963 Male, age 80, left hemisphere 18.1
2249 Male, age 74, both hemispheres 18.0
Hippocampus, CA3
nTPM: 20.6
1891 Female, age 85, both hemispheres 24.8
1867 Male, age 76, both hemispheres 21.8
2436 Male, age 74, both hemispheres 20.7
2137 Male, age 80, left hemisphere 20.0
2620 Female, age 94, left hemisphere 19.6
2861 Female, age 67, both hemispheres 16.6
Parahippocampal cortex
nTPM: 23.8
2250 Female, age 67, right hemisphere 30.6
2018 Male, age 76, both hemispheres 27.6
2693 Female, age 94, both hemispheres 27.1
1850 Male, age 80, both hemispheres 25.7
1933 Female, age 85, both hemispheres 24.9
2532 Female, age 72, left hemisphere 23.5
1990 Female, age 91, right hemisphere 23.3
2245 Female, age 91, both hemispheres 21.3
2692 Male, age 74, both hemispheres 17.3
2622 Female, age 67, right hemisphere 17.1
Perirhinal gyrus
nTPM: 24.8
1841 Female, age 85, right hemisphere 30.4
2521 Female, age 94, right hemisphere 24.0
1847 Female, age 91, left hemisphere 23.9
2848 Male, age 76, right hemisphere 22.9
1794 Male, age 80, right hemisphere 22.8
Subiculum
nTPM: 22.3
2042 Male, age 76, both hemispheres 24.6
2729 Female, age 91, right hemisphere 24.4
1977 Female, age 85, both hemispheres 23.6
2438 Female, age 94, left hemisphere 22.2
1901 Male, age 80, both hemispheres 20.6
2619 Male, age 74, both hemispheres 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 17.5
Min nTPM: 5.1
Std nTPM: 2.3
Median nTPM: 9.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 17.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 17.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 16.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 16.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 16.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 16.2
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 16.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 16.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 15.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 14.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 14.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.4
FF:10153-102I9 76 years, female 38.8
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.5
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 15.2
Sample A Female 18.6
Sample B Female 15.2
Sample C Male 16.6
Sample D Male 17.0
Dorsal hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 17.4
Sample A Female 17.4
Sample B Female 20.7
Sample C Male 17.9
Sample D Male 17.7
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.1
Sample A Female 20.3
Sample B Female 23.3
Sample C Male 20.4
Sample D Male 18.1
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.8
Sample A Female 16.2
Sample B Female 17.3
Sample C Male 16.3
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 11.0
Min nTPM: 9.5
Sample A Male 9.6
Sample B Male 9.5
Sample C Female 9.6
Sample D Female 11.0
Hippocampal formation
nTPM: 10.5
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.0
Sample A Male 9.3
Sample B Male 11.1
Sample C Female 12.4
Sample D Female 9.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70300324 Antisense, RP_050607_01_C05, Mouse strain C57BL/6J (56 days, male) 0.3

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