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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.7
nTPM
Monaco:
306.3
nTPM
Schmiedel:
222.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.7
HPA sample
nTPM
gdT-cell nTPM: 20.8
Samples: 6
Max nTPM: 25.5
Min nTPM: 16.4
P10809_1007
16.4
P10809_1022
20.6
P10809_1041
16.7
P10809_1060
24.4
P10809_1077
21.2
P10809_1098
25.5
MAIT T-cell nTPM: 27.6
Samples: 6
Max nTPM: 33.4
Min nTPM: 19.2
P10809_1006
24.9
P10809_1024
31.4
P10809_1043
19.2
P10809_1062
30.9
P10809_1083
25.5
P10809_1097
33.4
Memory CD4 T-cell nTPM: 25.3
Samples: 6
Max nTPM: 31.3
Min nTPM: 19.0
P10809_1014
26.9
P10809_1026
19.2
P10809_1045
19.0
P10809_1064
27.2
P10809_1086
31.3
P10809_1113
27.9
Memory CD8 T-cell nTPM: 23.7
Samples: 5
Max nTPM: 33.3
Min nTPM: 17.2
P10809_1012
21.4
P10809_1027
20.2
P10809_1046
17.2
P10809_1065
33.3
P10809_1111
26.2
Naive CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 40.3
Min nTPM: 24.6
P10809_1015
40.3
P10809_1030
27.2
P10809_1049
24.6
P10809_1068
31.9
P10809_1085
35.7
P10809_1112
36.2
Naive CD8 T-cell nTPM: 27.3
Samples: 6
Max nTPM: 37.1
Min nTPM: 16.7
P10809_1016
27.6
P10809_1031
16.7
P10809_1050
21.7
P10809_1069
37.1
P10809_1087
24.3
P10809_1110
36.5
T-reg nTPM: 16.0
Samples: 6
Max nTPM: 26.1
Min nTPM: 6.3
P10809_1018
13.5
P10809_1037
26.1
P10809_1056
13.6
P10809_1075
6.3
P10809_1094
16.8
P10809_1106
19.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
306.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 228.1
Samples: 4
Max nTPM: 310.0
Min nTPM: 184.3
RHH5202_R3573
310.0
RHH5230_R3602
223.5
RHH5259_R3631
194.4
RHH5288_R3660
184.3
Effector memory CD8 T-cell nTPM: 154.6
Samples: 4
Max nTPM: 218.6
Min nTPM: 94.0
RHH5203_R3574
218.6
RHH5231_R3603
160.3
RHH5260_R3632
94.0
RHH5289_R3661
145.5
MAIT T-cell nTPM: 198.6
Samples: 4
Max nTPM: 265.0
Min nTPM: 158.9
RHH5233_R3605
189.8
RHH5205_R3576
265.0
RHH5262_R3634
180.6
RHH5297_R3663
158.9
Memory CD4 T-cell TFH nTPM: 216.8
Samples: 4
Max nTPM: 254.9
Min nTPM: 189.1
RHH5300_R3666
198.2
RHH5236_R3608
225.1
RHH5265_R3637
189.1
RHH5208_R3579
254.9
Memory CD4 T-cell Th1 nTPM: 201.2
Samples: 4
Max nTPM: 240.6
Min nTPM: 161.4
RHH5210_R3581
240.6
RHH5302_R3668
204.3
RHH5238_R3610
198.5
RHH5267_R3639
161.4
Memory CD4 T-cell Th1/Th17 nTPM: 207.9
Samples: 4
Max nTPM: 260.5
Min nTPM: 178.9
RHH5303_R3669
191.3
RHH5211_R3582
260.5
RHH5239_R3611
200.9
RHH5268_R3640
178.9
Memory CD4 T-cell Th17 nTPM: 206.1
Samples: 4
Max nTPM: 237.3
Min nTPM: 176.9
RHH5304_R3670
195.8
RHH5212_R3583
214.4
RHH5240_R3612
237.3
RHH5269_R3641
176.9
Memory CD4 T-cell Th2 nTPM: 178.4
Samples: 4
Max nTPM: 217.8
Min nTPM: 143.8
RHH5305_R3671
157.7
RHH5213_R3584
217.8
RHH5241_R3613
194.3
RHH5270_R3642
143.8
Naive CD4 T-cell nTPM: 255.3
Samples: 4
Max nTPM: 391.1
Min nTPM: 183.4
RHH5306_R3672
210.2
RHH5214_R3585
391.1
RHH5242_R3614
236.6
RHH5271_R3643
183.4
Naive CD8 T-cell nTPM: 306.3
Samples: 4
Max nTPM: 408.9
Min nTPM: 253.0
RHH5201_R3572
408.9
RHH5229_R3601
277.0
RHH5258_R3630
253.0
RHH5287_R3659
286.4
Non-Vd2 gdTCR nTPM: 116.6
Samples: 4
Max nTPM: 155.3
Min nTPM: 99.3
RHH5235_R3607
99.3
RHH5264_R3636
100.9
RHH5207_R3578
155.3
RHH5299_R3665
110.9
T-reg nTPM: 150.4
Samples: 4
Max nTPM: 217.9
Min nTPM: 106.8
RHH5301_R3667
143.3
RHH5237_R3609
133.7
RHH5266_R3638
106.8
RHH5209_R3580
217.9
Terminal effector memory CD4 T-cell nTPM: 98.3
Samples: 2
Max nTPM: 102.0
Min nTPM: 94.6
RHH5243_R3615
94.6
RHH5272_R3644
102.0
Terminal effector memory CD8 T-cell nTPM: 136.5
Samples: 4
Max nTPM: 208.3
Min nTPM: 91.4
RHH5232_R3604
140.8
RHH5204_R3575
208.3
RHH5261_R3633
91.4
RHH5296_R3662
105.4
Vd2 gdTCR nTPM: 158.1
Samples: 4
Max nTPM: 182.3
Min nTPM: 130.9
RHH5234_R3606
168.1
RHH5206_R3577
182.3
RHH5263_R3635
151.2
RHH5298_R3664
130.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
