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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
10670.6
nTPM
Monaco:
1909.3
nTPM
Schmiedel:
851.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10670.6
HPA sample
nTPM
gdT-cell nTPM: 4375.2
Samples: 6
Max nTPM: 5554.7
Min nTPM: 3274.0
P10809_1007
5554.7
P10809_1022
3796.2
P10809_1041
5199.7
P10809_1060
3274.0
P10809_1077
4243.0
P10809_1098
4183.7
MAIT T-cell nTPM: 7249.6
Samples: 6
Max nTPM: 7967.1
Min nTPM: 6357.4
P10809_1006
6968.0
P10809_1024
7868.3
P10809_1043
7148.7
P10809_1062
7188.1
P10809_1083
6357.4
P10809_1097
7967.1
Memory CD4 T-cell nTPM: 7832.2
Samples: 6
Max nTPM: 10019.0
Min nTPM: 5790.4
P10809_1014
9051.9
P10809_1026
10019.0
P10809_1045
7485.9
P10809_1064
6225.4
P10809_1086
5790.4
P10809_1113
8420.8
Memory CD8 T-cell nTPM: 6127.7
Samples: 5
Max nTPM: 6995.5
Min nTPM: 5471.1
P10809_1012
6682.9
P10809_1027
6995.5
P10809_1046
5815.3
P10809_1065
5471.1
P10809_1111
5673.8
Naive CD4 T-cell nTPM: 10670.6
Samples: 6
Max nTPM: 13518.2
Min nTPM: 7651.8
P10809_1015
12623.6
P10809_1030
13518.2
P10809_1049
8093.8
P10809_1068
11371.9
P10809_1085
7651.8
P10809_1112
10764.5
Naive CD8 T-cell nTPM: 8809.0
Samples: 6
Max nTPM: 15012.8
Min nTPM: 4206.4
P10809_1016
15012.8
P10809_1031
9888.1
P10809_1050
7642.6
P10809_1069
7685.0
P10809_1087
4206.4
P10809_1110
8419.0
T-reg nTPM: 5434.6
Samples: 6
Max nTPM: 6277.3
Min nTPM: 4476.8
P10809_1018
4871.8
P10809_1037
6277.3
P10809_1056
4476.8
P10809_1075
5710.2
P10809_1094
5845.3
P10809_1106
5426.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1909.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1212.7
Samples: 4
Max nTPM: 1783.2
Min nTPM: 599.0
RHH5202_R3573
599.0
RHH5230_R3602
1555.6
RHH5259_R3631
1783.2
RHH5288_R3660
912.9
Effector memory CD8 T-cell nTPM: 580.8
Samples: 4
Max nTPM: 1083.6
Min nTPM: 388.3
RHH5203_R3574
444.0
RHH5231_R3603
388.3
RHH5260_R3632
1083.6
RHH5289_R3661
407.1
MAIT T-cell nTPM: 930.8
Samples: 4
Max nTPM: 1192.6
Min nTPM: 613.5
RHH5233_R3605
613.5
RHH5205_R3576
1192.6
RHH5262_R3634
1111.7
RHH5297_R3663
805.5
Memory CD4 T-cell TFH nTPM: 857.2
Samples: 4
Max nTPM: 1217.7
Min nTPM: 605.4
RHH5300_R3666
816.2
RHH5236_R3608
1217.7
RHH5265_R3637
789.3
RHH5208_R3579
605.4
Memory CD4 T-cell Th1 nTPM: 1498.3
Samples: 4
Max nTPM: 2480.2
Min nTPM: 558.5
RHH5210_R3581
558.5
RHH5302_R3668
1195.8
RHH5238_R3610
2480.2
RHH5267_R3639
1758.6
Memory CD4 T-cell Th1/Th17 nTPM: 1312.3
Samples: 4
Max nTPM: 1872.4
Min nTPM: 612.4
RHH5303_R3669
954.0
RHH5211_R3582
612.4
RHH5239_R3611
1872.4
RHH5268_R3640
1810.2
Memory CD4 T-cell Th17 nTPM: 1257.2
Samples: 4
Max nTPM: 1703.4
Min nTPM: 676.9
RHH5304_R3670
1703.4
RHH5212_R3583
676.9
RHH5240_R3612
1408.7
RHH5269_R3641
1239.6
Memory CD4 T-cell Th2 nTPM: 1234.2
Samples: 4
Max nTPM: 1976.8
Min nTPM: 945.4
RHH5305_R3671
1976.8
RHH5213_R3584
968.5
RHH5241_R3613
945.4
RHH5270_R3642
1046.2
Naive CD4 T-cell nTPM: 1909.3
Samples: 4
Max nTPM: 2346.6
Min nTPM: 1168.5
RHH5306_R3672
2346.6
RHH5214_R3585
2303.8
RHH5242_R3614
1168.5
RHH5271_R3643
1818.3
Naive CD8 T-cell nTPM: 1810.4
Samples: 4
Max nTPM: 2916.8
Min nTPM: 953.4
RHH5201_R3572
953.4
RHH5229_R3601
2916.8
RHH5258_R3630
1043.4
RHH5287_R3659
2328.0
Non-Vd2 gdTCR nTPM: 633.2
Samples: 4
Max nTPM: 967.4
Min nTPM: 466.1
RHH5235_R3607
967.4
RHH5264_R3636
576.6
RHH5207_R3578
466.1
RHH5299_R3665
522.8
T-reg nTPM: 1168.9
Samples: 4
Max nTPM: 1417.6
Min nTPM: 856.5
RHH5301_R3667
1034.1
RHH5237_R3609
856.5
RHH5266_R3638
1417.6
RHH5209_R3580
1367.4
Terminal effector memory CD4 T-cell nTPM: 732.6
Samples: 2
Max nTPM: 895.2
Min nTPM: 569.9
RHH5243_R3615
895.2
RHH5272_R3644
569.9
Terminal effector memory CD8 T-cell nTPM: 774.1
Samples: 4
Max nTPM: 1216.2
Min nTPM: 328.9
RHH5232_R3604
328.9
RHH5204_R3575
993.7
RHH5261_R3633
1216.2
RHH5296_R3662
557.5
Vd2 gdTCR nTPM: 1363.7
Samples: 4
Max nTPM: 2056.5
Min nTPM: 857.5
RHH5234_R3606
857.5
RHH5206_R3577
2056.5
RHH5263_R3635
1526.1
RHH5298_R3664
1014.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.