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WDR1
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  • WDR1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

WDR1
Synonyms AIP1
Gene descriptioni

Full gene name according to HGNC.

WD repeat domain 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband p16.1
Chromosome location (bp) 10068089 - 10116972
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000071127 (version 109)
Entrez gene 9948
HGNC HGNC:12754
UniProt O75083 (UniProt - Evidence at protein level)
neXtProt NX_O75083
GeneCards WDR1
Antibodypedia WDR1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins 1, 2, 3. Enhances cofilin-mediated actin severing (By similarity). Involved in cytokinesis. Involved in chemotactic cell migration by restricting lamellipodial membrane protrusions 4. Involved in myocardium sarcomere organization. Required for cardiomyocyte growth and maintenance (By similarity). Involved in megakaryocyte maturation and platelet shedding. Required for the establishment of planar cell polarity (PCP) during follicular epithelium development and for cell shape changes during PCP; the function seems to implicate cooperation with CFL1 and/or DSTN/ADF. Involved in the generation/maintenance of cortical tension (By similarity). Involved in assembly and maintenance of epithelial apical cell junctions and plays a role in the organization of the perijunctional actomyosin belt 5.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Actin-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein containing 9 WD repeats. WD repeats are approximately 30- to 40-amino acid domains containing several conserved residues, mostly including a trp-asp at the C-terminal end. WD domains are involved in protein-protein interactions. The encoded protein may help induce the disassembly of actin filaments. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
WDR1-201
ENSP00000514597
ENST00000264785
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Other immune system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
333 aa
36.4 kDa
No 0
WDR1-202
ENSP00000427687
ENST00000499869
O75083
[Direct mapping] WD repeat-containing protein 1
Show all
V9HWG7
[Target identity:100%; Query identity:100%] Epididymis secretory protein Li 52
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Other immune system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002102 [podosome]
GO:0002446 [neutrophil mediated immunity]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005911 [cell-cell junction]
GO:0007605 [sensory perception of sound]
GO:0008360 [regulation of cell shape]
GO:0015629 [actin cytoskeleton]
GO:0030036 [actin cytoskeleton organization]
GO:0030042 [actin filament depolymerization]
GO:0030043 [actin filament fragmentation]
GO:0030054 [cell junction]
GO:0030220 [platelet formation]
GO:0030834 [regulation of actin filament depolymerization]
GO:0030836 [positive regulation of actin filament depolymerization]
GO:0030864 [cortical actin cytoskeleton]
GO:0030865 [cortical cytoskeleton organization]
GO:0040011 [locomotion]
GO:0042247 [establishment of planar polarity of follicular epithelium]
GO:0042995 [cell projection]
GO:0043297 [apical junction assembly]
GO:0045199 [maintenance of epithelial cell apical/basal polarity]
GO:0045214 [sarcomere organization]
GO:0048713 [regulation of oligodendrocyte differentiation]
GO:0051015 [actin filament binding]
GO:0060307 [regulation of ventricular cardiac muscle cell membrane repolarization]
GO:0070062 [extracellular exosome]
GO:0070161 [anchoring junction]
GO:1990266 [neutrophil migration]
Show all
606 aa
66.2 kDa
No 0
WDR1-203
ENSP00000426725
ENST00000502702
O75083
[Direct mapping] WD repeat-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Other immune system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002102 [podosome]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005911 [cell-cell junction]
GO:0007605 [sensory perception of sound]
GO:0030042 [actin filament depolymerization]
GO:0030054 [cell junction]
GO:0030834 [regulation of actin filament depolymerization]
GO:0030836 [positive regulation of actin filament depolymerization]
GO:0030864 [cortical actin cytoskeleton]
GO:0040011 [locomotion]
GO:0042995 [cell projection]
GO:0043297 [apical junction assembly]
GO:0045199 [maintenance of epithelial cell apical/basal polarity]
GO:0045214 [sarcomere organization]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
GO:0070161 [anchoring junction]
Show all
466 aa
50.7 kDa
No 0
WDR1-209
ENSP00000425481
ENST00000508079
D6RD66
[Direct mapping] WD repeat-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Other immune system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
245 aa
26.8 kDa
No 0
WDR1-226
ENSP00000514596
ENST00000699794
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Other immune system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
659 aa
72.1 kDa
No 0
WDR1-228
ENSP00000514599
ENST00000699796
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Other immune system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
572 aa
62.3 kDa
No 0
WDR1-229
ENSP00000514600
ENST00000699797
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Other immune system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
579 aa
63.4 kDa
No 0

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