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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.7
nTPM
Monaco:
253.0
nTPM
Schmiedel:
375.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.7
HPA sample
nTPM
gdT-cell nTPM: 12.7
Samples: 6
Max nTPM: 19.2
Min nTPM: 7.6
P10809_1007
12.3
P10809_1022
10.8
P10809_1041
7.6
P10809_1060
17.6
P10809_1077
8.4
P10809_1098
19.2
MAIT T-cell nTPM: 15.8
Samples: 6
Max nTPM: 21.1
Min nTPM: 10.1
P10809_1006
21.1
P10809_1024
17.6
P10809_1043
15.9
P10809_1062
18.5
P10809_1083
10.1
P10809_1097
11.6
Memory CD4 T-cell nTPM: 26.0
Samples: 6
Max nTPM: 38.5
Min nTPM: 15.2
P10809_1014
29.9
P10809_1026
38.5
P10809_1045
32.8
P10809_1064
16.3
P10809_1086
15.2
P10809_1113
23.4
Memory CD8 T-cell nTPM: 13.8
Samples: 5
Max nTPM: 20.6
Min nTPM: 5.0
P10809_1012
20.6
P10809_1027
5.0
P10809_1046
15.6
P10809_1065
10.6
P10809_1111
17.1
Naive CD4 T-cell nTPM: 15.0
Samples: 6
Max nTPM: 18.3
Min nTPM: 11.7
P10809_1015
18.3
P10809_1030
13.2
P10809_1049
17.3
P10809_1068
14.4
P10809_1085
11.7
P10809_1112
15.0
Naive CD8 T-cell nTPM: 9.2
Samples: 6
Max nTPM: 11.3
Min nTPM: 7.3
P10809_1016
8.9
P10809_1031
7.3
P10809_1050
9.6
P10809_1069
9.0
P10809_1087
11.3
P10809_1110
8.8
T-reg nTPM: 48.8
Samples: 6
Max nTPM: 56.7
Min nTPM: 40.3
P10809_1018
56.7
P10809_1037
53.4
P10809_1056
41.3
P10809_1075
40.3
P10809_1094
50.8
P10809_1106
50.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
253.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 158.1
Samples: 4
Max nTPM: 180.6
Min nTPM: 114.7
RHH5202_R3573
114.7
RHH5230_R3602
180.6
RHH5259_R3631
164.0
RHH5288_R3660
173.0
Effector memory CD8 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 156.0
Min nTPM: 67.1
RHH5203_R3574
96.6
RHH5231_R3603
67.1
RHH5260_R3632
95.1
RHH5289_R3661
156.0
MAIT T-cell nTPM: 95.7
Samples: 4
Max nTPM: 111.1
Min nTPM: 81.5
RHH5233_R3605
90.1
RHH5205_R3576
111.1
RHH5262_R3634
81.5
RHH5297_R3663
100.1
Memory CD4 T-cell TFH nTPM: 253.0
Samples: 4
Max nTPM: 301.4
Min nTPM: 229.8
RHH5300_R3666
246.3
RHH5236_R3608
229.8
RHH5265_R3637
234.6
RHH5208_R3579
301.4
Memory CD4 T-cell Th1 nTPM: 151.9
Samples: 4
Max nTPM: 170.9
Min nTPM: 119.9
RHH5210_R3581
119.9
RHH5302_R3668
170.9
RHH5238_R3610
164.1
RHH5267_R3639
152.8
Memory CD4 T-cell Th1/Th17 nTPM: 147.5
Samples: 4
Max nTPM: 161.1
Min nTPM: 127.1
RHH5303_R3669
150.6
RHH5211_R3582
161.1
RHH5239_R3611
151.3
RHH5268_R3640
127.1
Memory CD4 T-cell Th17 nTPM: 216.0
Samples: 4
Max nTPM: 269.3
Min nTPM: 162.5
RHH5304_R3670
212.2
RHH5212_R3583
162.5
RHH5240_R3612
269.3
RHH5269_R3641
219.9
Memory CD4 T-cell Th2 nTPM: 192.8
Samples: 4
Max nTPM: 225.0
Min nTPM: 150.0
RHH5305_R3671
212.0
RHH5213_R3584
150.0
RHH5241_R3613
184.2
RHH5270_R3642
225.0
Naive CD4 T-cell nTPM: 134.2
Samples: 4
Max nTPM: 157.7
Min nTPM: 100.2
RHH5306_R3672
133.0
RHH5214_R3585
100.2
RHH5242_R3614
157.7
RHH5271_R3643
145.7
Naive CD8 T-cell nTPM: 80.6
Samples: 4
Max nTPM: 94.0
Min nTPM: 62.2
RHH5201_R3572
78.4
RHH5229_R3601
94.0
RHH5258_R3630
62.2
RHH5287_R3659
87.6
Non-Vd2 gdTCR nTPM: 74.3
Samples: 4
Max nTPM: 100.6
Min nTPM: 59.3
RHH5235_R3607
70.8
RHH5264_R3636
66.3
RHH5207_R3578
59.3
RHH5299_R3665
100.6
T-reg nTPM: 179.0
Samples: 4
Max nTPM: 211.4
Min nTPM: 153.3
RHH5301_R3667
211.4
RHH5237_R3609
176.7
RHH5266_R3638
174.7
RHH5209_R3580
153.3
Terminal effector memory CD4 T-cell nTPM: 69.0
Samples: 2
Max nTPM: 71.5
Min nTPM: 66.5
RHH5243_R3615
71.5
RHH5272_R3644
66.5
Terminal effector memory CD8 T-cell nTPM: 73.8
Samples: 4
Max nTPM: 116.7
Min nTPM: 45.9
RHH5232_R3604
59.4
RHH5204_R3575
45.9
RHH5261_R3633
73.2
RHH5296_R3662
116.7
Vd2 gdTCR nTPM: 87.3
Samples: 4
Max nTPM: 115.5
Min nTPM: 63.6
RHH5234_R3606
79.6
RHH5206_R3577
63.6
RHH5263_R3635
90.6
RHH5298_R3664
115.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
