HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:59.1 nTPM
HPA Brain:34.9 nTPM
GTEx:59.1 nTPM
FANTOM5:68.0 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:23.3 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003585
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.9
Sample id Sample description nTPM
Hippocampus
nTPM: 32.9
2529 Female, age 94, left hemisphere 40.8
1898 Male, age 80, left hemisphere 33.9
2621 Female, age 67, right hemisphere 33.0
2148 Female, age 91, left hemisphere 30.5
1911 Female, age 85, right hemisphere 30.3
1855 Male, age 76, left hemisphere 28.8
Dentate gyrus
nTPM: 32.5
2530 Female, age 94, left hemisphere 41.2
2010 Male, age 76, both hemispheres 37.6
2528 Male, age 74, both hemispheres 30.9
1927 Female, age 91, both hemispheres 29.9
2531 Female, age 67, both hemispheres 29.2
2246 Female, age 85, both hemispheres 26.3
Entorhinal gyrus
nTPM: 31.3
2117 Female, age 91, right hemisphere 36.9
2764 Male, age 80, right hemisphere 35.7
1787 Male, age 76, left hemisphere 30.8
1938 Female, age 85, left hemisphere 28.4
2686 Male, age 75, right hemisphere 28.1
2613 Female, age 94, left hemisphere 28.0
Hippocampus, CA1
nTPM: 30.7
2749 Male, age 80, left hemisphere 33.3
2527 Male, age 74, both hemispheres 32.8
1873 Female, age 85, both hemispheres 32.5
2082 Female, age 91, right hemisphere 28.6
2045 Male, age 76, both hemispheres 26.1
Hippocampus, CA2
nTPM: 32.5
1892 Male, age 76, both hemispheres 38.3
2437 Female, age 94, left hemisphere 34.1
1940 Female, age 85, left hemisphere 33.9
1963 Male, age 80, left hemisphere 32.7
2249 Male, age 74, both hemispheres 29.0
2113 Female, age 91, right hemisphere 26.8
Hippocampus, CA3
nTPM: 31.0
2620 Female, age 94, left hemisphere 34.9
1867 Male, age 76, both hemispheres 34.6
1891 Female, age 85, both hemispheres 30.8
2861 Female, age 67, both hemispheres 29.9
2436 Male, age 74, both hemispheres 29.2
2137 Male, age 80, left hemisphere 26.8
Parahippocampal cortex
nTPM: 29.8
2018 Male, age 76, both hemispheres 35.0
2532 Female, age 72, left hemisphere 33.8
2245 Female, age 91, both hemispheres 33.0
2692 Male, age 74, both hemispheres 30.0
1933 Female, age 85, both hemispheres 29.5
1850 Male, age 80, both hemispheres 29.0
1990 Female, age 91, right hemisphere 29.0
2250 Female, age 67, right hemisphere 28.0
2622 Female, age 67, right hemisphere 28.0
2693 Female, age 94, both hemispheres 22.1
Perirhinal gyrus
nTPM: 27.2
1794 Male, age 80, right hemisphere 30.5
2521 Female, age 94, right hemisphere 28.8
1847 Female, age 91, left hemisphere 26.1
1841 Female, age 85, right hemisphere 25.5
2848 Male, age 76, right hemisphere 25.1
Subiculum
nTPM: 34.9
2042 Male, age 76, both hemispheres 40.8
2438 Female, age 94, left hemisphere 38.6
1901 Male, age 80, both hemispheres 35.2
2619 Male, age 74, both hemispheres 33.9
1977 Female, age 85, both hemispheres 32.9
2729 Female, age 91, right hemisphere 28.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.1
Samples: 197

Max nTPM: 111.6
Min nTPM: 30.5
Std nTPM: 11.9
Median nTPM: 58.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 111.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 97.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 95.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 93.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 92.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 88.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 88.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 81.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 80.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 78.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 77.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.0
FF:10153-102I9 76 years, female 89.3
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Subiculum
nTPM: 20.8
Samples: 4

Max nTPM: 26.1
Min nTPM: 18.6
Sample A Female 26.1
Sample B Female 19.2
Sample C Male 19.2
Sample D Male 18.6
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 29.9
Min nTPM: 20.3
Sample A Female 29.9
Sample B Female 20.3
Sample C Male 22.2
Sample D Male 21.9
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 20.2
Sample A Female 22.8
Sample B Female 21.7
Sample C Male 20.4
Sample D Male 20.2
Ventral hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 25.7
Min nTPM: 16.6
Sample A Female 20.4
Sample B Female 16.6
Sample C Male 25.1
Sample D Male 25.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.4
Sample A Male 23.9
Sample B Male 24.2
Sample C Female 23.8
Sample D Female 21.4
Hippocampal formation
nTPM: 22.9
Samples: 4

Max nTPM: 25.7
Min nTPM: 21.0
Sample A Male 25.7
Sample B Male 22.6
Sample C Female 21.0
Sample D Female 22.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
74882206 Antisense, RP_060315_04_E05, Mouse strain C57BL/6J (56 days, male) 10.8
69608414 Antisense, RP_050426_04_A11, Mouse strain C57BL/6J (56 days, male) 7.3

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