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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.4
nTPM
Monaco:
45.1
nTPM
Schmiedel:
103.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.4
HPA sample
nTPM
gdT-cell nTPM: 43.9
Samples: 6
Max nTPM: 62.8
Min nTPM: 29.2
P10809_1007
29.2
P10809_1022
46.1
P10809_1041
62.8
P10809_1060
44.8
P10809_1077
40.6
P10809_1098
39.9
MAIT T-cell nTPM: 59.4
Samples: 6
Max nTPM: 83.3
Min nTPM: 43.2
P10809_1006
43.2
P10809_1024
73.9
P10809_1043
83.3
P10809_1062
56.5
P10809_1083
44.1
P10809_1097
55.2
Memory CD4 T-cell nTPM: 45.9
Samples: 6
Max nTPM: 78.8
Min nTPM: 29.5
P10809_1014
36.0
P10809_1026
78.8
P10809_1045
55.8
P10809_1064
31.7
P10809_1086
29.5
P10809_1113
43.6
Memory CD8 T-cell nTPM: 42.2
Samples: 5
Max nTPM: 55.6
Min nTPM: 29.9
P10809_1012
29.9
P10809_1027
40.2
P10809_1046
55.6
P10809_1065
39.5
P10809_1111
46.0
Naive CD4 T-cell nTPM: 24.8
Samples: 6
Max nTPM: 36.8
Min nTPM: 16.6
P10809_1015
16.6
P10809_1030
25.1
P10809_1049
25.9
P10809_1068
21.8
P10809_1085
36.8
P10809_1112
22.7
Naive CD8 T-cell nTPM: 34.5
Samples: 6
Max nTPM: 46.0
Min nTPM: 24.3
P10809_1016
24.3
P10809_1031
46.0
P10809_1050
33.5
P10809_1069
37.6
P10809_1087
30.7
P10809_1110
34.7
T-reg nTPM: 53.7
Samples: 6
Max nTPM: 65.8
Min nTPM: 39.1
P10809_1018
39.1
P10809_1037
55.5
P10809_1056
51.2
P10809_1075
45.2
P10809_1094
65.8
P10809_1106
65.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 22.1
Samples: 4
Max nTPM: 52.5
Min nTPM: 2.4
RHH5202_R3573
2.4
RHH5230_R3602
52.5
RHH5259_R3631
25.3
RHH5288_R3660
8.3
Effector memory CD8 T-cell nTPM: 29.8
Samples: 4
Max nTPM: 57.1
Min nTPM: 7.0
RHH5203_R3574
7.0
RHH5231_R3603
57.1
RHH5260_R3632
44.2
RHH5289_R3661
10.8
MAIT T-cell nTPM: 37.1
Samples: 4
Max nTPM: 77.0
Min nTPM: 14.3
RHH5233_R3605
14.3
RHH5205_R3576
26.5
RHH5262_R3634
77.0
RHH5297_R3663
30.7
Memory CD4 T-cell TFH nTPM: 32.5
Samples: 4
Max nTPM: 63.2
Min nTPM: 3.4
RHH5300_R3666
63.2
RHH5236_R3608
58.5
RHH5265_R3637
3.4
RHH5208_R3579
4.7
Memory CD4 T-cell Th1 nTPM: 26.2
Samples: 4
Max nTPM: 45.2
Min nTPM: 10.8
RHH5210_R3581
10.8
RHH5302_R3668
13.2
RHH5238_R3610
35.5
RHH5267_R3639
45.2
Memory CD4 T-cell Th1/Th17 nTPM: 34.4
Samples: 4
Max nTPM: 58.6
Min nTPM: 6.9
RHH5303_R3669
6.9
RHH5211_R3582
57.3
RHH5239_R3611
14.8
RHH5268_R3640
58.6
Memory CD4 T-cell Th17 nTPM: 35.5
Samples: 4
Max nTPM: 75.4
Min nTPM: 7.1
RHH5304_R3670
7.7
RHH5212_R3583
75.4
RHH5240_R3612
7.1
RHH5269_R3641
51.9
Memory CD4 T-cell Th2 nTPM: 35.7
Samples: 4
Max nTPM: 55.6
Min nTPM: 4.9
RHH5305_R3671
31.7
RHH5213_R3584
50.5
RHH5241_R3613
4.9
RHH5270_R3642
55.6
Naive CD4 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 32.4
Min nTPM: 2.8
RHH5306_R3672
32.4
RHH5214_R3585
26.3
RHH5242_R3614
2.8
RHH5271_R3643
16.3
Naive CD8 T-cell nTPM: 15.4
Samples: 4
Max nTPM: 23.4
Min nTPM: 4.6
RHH5201_R3572
4.6
RHH5229_R3601
19.2
RHH5258_R3630
23.4
RHH5287_R3659
14.5
Non-Vd2 gdTCR nTPM: 28.3
Samples: 4
Max nTPM: 70.5
Min nTPM: 3.4
RHH5235_R3607
30.8
RHH5264_R3636
3.4
RHH5207_R3578
8.4
RHH5299_R3665
70.5
T-reg nTPM: 45.1
Samples: 4
Max nTPM: 57.7
Min nTPM: 29.7
RHH5301_R3667
49.1
RHH5237_R3609
57.7
RHH5266_R3638
29.7
RHH5209_R3580
43.9
Terminal effector memory CD4 T-cell nTPM: 17.5
Samples: 2
Max nTPM: 32.7
Min nTPM: 2.2
RHH5243_R3615
32.7
RHH5272_R3644
2.2
Terminal effector memory CD8 T-cell nTPM: 21.1
Samples: 4
Max nTPM: 50.6
Min nTPM: 5.9
RHH5232_R3604
8.4
RHH5204_R3575
19.5
RHH5261_R3633
50.6
RHH5296_R3662
5.9
Vd2 gdTCR nTPM: 24.7
Samples: 4
Max nTPM: 47.3
Min nTPM: 11.8
RHH5234_R3606
18.7
RHH5206_R3577
20.9
RHH5263_R3635
11.8
RHH5298_R3664
47.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
