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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.3
nTPM
Monaco:
145.0
nTPM
Schmiedel:
53.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.3
HPA sample
nTPM
gdT-cell nTPM: 62.4
Samples: 6
Max nTPM: 81.5
Min nTPM: 45.5
P10809_1007
45.5
P10809_1022
81.5
P10809_1041
77.8
P10809_1060
55.0
P10809_1077
54.5
P10809_1098
60.0
MAIT T-cell nTPM: 68.3
Samples: 6
Max nTPM: 85.1
Min nTPM: 53.4
P10809_1006
55.7
P10809_1024
85.1
P10809_1043
81.3
P10809_1062
63.8
P10809_1083
53.4
P10809_1097
70.5
Memory CD4 T-cell nTPM: 67.9
Samples: 6
Max nTPM: 105.1
Min nTPM: 52.4
P10809_1014
53.1
P10809_1026
105.1
P10809_1045
71.7
P10809_1064
68.5
P10809_1086
56.4
P10809_1113
52.4
Memory CD8 T-cell nTPM: 61.5
Samples: 5
Max nTPM: 66.4
Min nTPM: 56.7
P10809_1012
59.2
P10809_1027
56.7
P10809_1046
66.4
P10809_1065
64.5
P10809_1111
60.6
Naive CD4 T-cell nTPM: 67.4
Samples: 6
Max nTPM: 87.5
Min nTPM: 48.8
P10809_1015
48.8
P10809_1030
81.3
P10809_1049
87.5
P10809_1068
64.4
P10809_1085
64.7
P10809_1112
57.6
Naive CD8 T-cell nTPM: 64.9
Samples: 6
Max nTPM: 71.1
Min nTPM: 52.0
P10809_1016
52.0
P10809_1031
69.1
P10809_1050
64.7
P10809_1069
70.4
P10809_1087
71.1
P10809_1110
62.2
T-reg nTPM: 65.2
Samples: 6
Max nTPM: 94.7
Min nTPM: 44.4
P10809_1018
44.4
P10809_1037
88.1
P10809_1056
94.7
P10809_1075
44.9
P10809_1094
51.5
P10809_1106
67.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
145.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 119.8
Samples: 4
Max nTPM: 180.5
Min nTPM: 92.5
RHH5202_R3573
109.4
RHH5230_R3602
180.5
RHH5259_R3631
96.9
RHH5288_R3660
92.5
Effector memory CD8 T-cell nTPM: 145.0
Samples: 4
Max nTPM: 168.2
Min nTPM: 115.5
RHH5203_R3574
115.5
RHH5231_R3603
168.2
RHH5260_R3632
141.1
RHH5289_R3661
155.1
MAIT T-cell nTPM: 99.4
Samples: 4
Max nTPM: 126.5
Min nTPM: 71.1
RHH5233_R3605
126.5
RHH5205_R3576
102.3
RHH5262_R3634
97.8
RHH5297_R3663
71.1
Memory CD4 T-cell TFH nTPM: 109.8
Samples: 4
Max nTPM: 166.0
Min nTPM: 80.5
RHH5300_R3666
80.5
RHH5236_R3608
166.0
RHH5265_R3637
94.6
RHH5208_R3579
98.0
Memory CD4 T-cell Th1 nTPM: 91.9
Samples: 4
Max nTPM: 111.0
Min nTPM: 78.5
RHH5210_R3581
97.7
RHH5302_R3668
78.5
RHH5238_R3610
80.5
RHH5267_R3639
111.0
Memory CD4 T-cell Th1/Th17 nTPM: 94.4
Samples: 4
Max nTPM: 118.1
Min nTPM: 80.7
RHH5303_R3669
118.1
RHH5211_R3582
95.3
RHH5239_R3611
80.7
RHH5268_R3640
83.3
Memory CD4 T-cell Th17 nTPM: 105.4
Samples: 4
Max nTPM: 127.7
Min nTPM: 89.2
RHH5304_R3670
98.4
RHH5212_R3583
89.2
RHH5240_R3612
127.7
RHH5269_R3641
106.1
Memory CD4 T-cell Th2 nTPM: 85.7
Samples: 4
Max nTPM: 95.0
Min nTPM: 78.8
RHH5305_R3671
82.4
RHH5213_R3584
78.8
RHH5241_R3613
86.5
RHH5270_R3642
95.0
Naive CD4 T-cell nTPM: 100.2
Samples: 4
Max nTPM: 115.8
Min nTPM: 74.1
RHH5306_R3672
103.0
RHH5214_R3585
115.8
RHH5242_R3614
74.1
RHH5271_R3643
107.8
Naive CD8 T-cell nTPM: 102.8
Samples: 4
Max nTPM: 122.0
Min nTPM: 84.5
RHH5201_R3572
114.1
RHH5229_R3601
84.5
RHH5258_R3630
122.0
RHH5287_R3659
90.6
Non-Vd2 gdTCR nTPM: 133.3
Samples: 4
Max nTPM: 166.0
Min nTPM: 81.9
RHH5235_R3607
166.0
RHH5264_R3636
153.8
RHH5207_R3578
131.5
RHH5299_R3665
81.9
T-reg nTPM: 86.8
Samples: 4
Max nTPM: 108.4
Min nTPM: 66.5
RHH5301_R3667
71.6
RHH5237_R3609
100.8
RHH5266_R3638
66.5
RHH5209_R3580
108.4
Terminal effector memory CD4 T-cell nTPM: 140.0
Samples: 2
Max nTPM: 140.3
Min nTPM: 139.6
RHH5243_R3615
140.3
RHH5272_R3644
139.6
Terminal effector memory CD8 T-cell nTPM: 128.1
Samples: 4
Max nTPM: 156.8
Min nTPM: 101.0
RHH5232_R3604
156.8
RHH5204_R3575
120.6
RHH5261_R3633
134.0
RHH5296_R3662
101.0
Vd2 gdTCR nTPM: 122.7
Samples: 4
Max nTPM: 154.3
Min nTPM: 98.6
RHH5234_R3606
122.1
RHH5206_R3577
115.8
RHH5263_R3635
154.3
RHH5298_R3664
98.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
