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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.5
nTPM
Monaco:
282.3
nTPM
Schmiedel:
143.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.5
HPA sample
nTPM
gdT-cell nTPM: 5.6
Samples: 6
Max nTPM: 14.0
Min nTPM: 0.6
P10809_1007
3.6
P10809_1022
9.2
P10809_1041
14.0
P10809_1060
3.6
P10809_1077
2.4
P10809_1098
0.6
MAIT T-cell nTPM: 6.9
Samples: 6
Max nTPM: 16.8
Min nTPM: 2.9
P10809_1006
4.9
P10809_1024
6.9
P10809_1043
16.8
P10809_1062
6.4
P10809_1083
3.5
P10809_1097
2.9
Memory CD4 T-cell nTPM: 21.4
Samples: 6
Max nTPM: 31.8
Min nTPM: 7.7
P10809_1014
31.8
P10809_1026
27.0
P10809_1045
31.3
P10809_1064
10.7
P10809_1086
7.7
P10809_1113
19.6
Memory CD8 T-cell nTPM: 11.1
Samples: 5
Max nTPM: 18.7
Min nTPM: 4.2
P10809_1012
13.5
P10809_1027
11.8
P10809_1046
18.7
P10809_1065
4.2
P10809_1111
7.1
Naive CD4 T-cell nTPM: 96.5
Samples: 6
Max nTPM: 110.1
Min nTPM: 69.9
P10809_1015
104.7
P10809_1030
97.8
P10809_1049
110.1
P10809_1068
94.9
P10809_1085
69.9
P10809_1112
101.7
Naive CD8 T-cell nTPM: 86.9
Samples: 6
Max nTPM: 149.6
Min nTPM: 4.0
P10809_1016
149.6
P10809_1031
108.6
P10809_1050
99.8
P10809_1069
59.6
P10809_1087
4.0
P10809_1110
99.7
T-reg nTPM: 8.2
Samples: 6
Max nTPM: 18.0
Min nTPM: 3.0
P10809_1018
18.0
P10809_1037
10.9
P10809_1056
5.7
P10809_1075
7.5
P10809_1094
4.3
P10809_1106
3.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
282.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.8
Samples: 4
Max nTPM: 75.2
Min nTPM: 41.2
RHH5202_R3573
41.2
RHH5230_R3602
41.5
RHH5259_R3631
75.2
RHH5288_R3660
45.2
Effector memory CD8 T-cell nTPM: 3.3
Samples: 4
Max nTPM: 4.7
Min nTPM: 1.4
RHH5203_R3574
1.4
RHH5231_R3603
2.5
RHH5260_R3632
4.7
RHH5289_R3661
4.4
MAIT T-cell nTPM: 5.3
Samples: 4
Max nTPM: 7.1
Min nTPM: 2.7
RHH5233_R3605
4.6
RHH5205_R3576
6.7
RHH5262_R3634
7.1
RHH5297_R3663
2.7
Memory CD4 T-cell TFH nTPM: 67.7
Samples: 4
Max nTPM: 87.8
Min nTPM: 48.5
RHH5300_R3666
59.4
RHH5236_R3608
87.8
RHH5265_R3637
75.1
RHH5208_R3579
48.5
Memory CD4 T-cell Th1 nTPM: 75.6
Samples: 4
Max nTPM: 92.7
Min nTPM: 68.0
RHH5210_R3581
92.7
RHH5302_R3668
70.0
RHH5238_R3610
68.0
RHH5267_R3639
71.7
Memory CD4 T-cell Th1/Th17 nTPM: 28.8
Samples: 4
Max nTPM: 58.8
Min nTPM: 12.6
RHH5303_R3669
12.6
RHH5211_R3582
20.7
RHH5239_R3611
58.8
RHH5268_R3640
23.2
Memory CD4 T-cell Th17 nTPM: 40.6
Samples: 4
Max nTPM: 47.4
Min nTPM: 29.3
RHH5304_R3670
29.3
RHH5212_R3583
40.4
RHH5240_R3612
47.4
RHH5269_R3641
45.1
Memory CD4 T-cell Th2 nTPM: 60.4
Samples: 4
Max nTPM: 80.4
Min nTPM: 46.6
RHH5305_R3671
66.3
RHH5213_R3584
48.1
RHH5241_R3613
46.6
RHH5270_R3642
80.4
Naive CD4 T-cell nTPM: 209.3
Samples: 4
Max nTPM: 270.9
Min nTPM: 171.6
RHH5306_R3672
197.5
RHH5214_R3585
171.6
RHH5242_R3614
197.2
RHH5271_R3643
270.9
Naive CD8 T-cell nTPM: 282.3
Samples: 4
Max nTPM: 411.0
Min nTPM: 87.5
RHH5201_R3572
87.5
RHH5229_R3601
411.0
RHH5258_R3630
316.3
RHH5287_R3659
314.2
Non-Vd2 gdTCR nTPM: 21.9
Samples: 4
Max nTPM: 27.2
Min nTPM: 9.0
RHH5235_R3607
26.7
RHH5264_R3636
24.7
RHH5207_R3578
9.0
RHH5299_R3665
27.2
T-reg nTPM: 82.4
Samples: 4
Max nTPM: 103.1
Min nTPM: 65.9
RHH5301_R3667
65.9
RHH5237_R3609
75.2
RHH5266_R3638
103.1
RHH5209_R3580
85.4
Terminal effector memory CD4 T-cell nTPM: 13.3
Samples: 2
Max nTPM: 21.0
Min nTPM: 5.5
RHH5243_R3615
5.5
RHH5272_R3644
21.0
Terminal effector memory CD8 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 19.5
Min nTPM: 5.9
RHH5232_R3604
5.9
RHH5204_R3575
10.1
RHH5261_R3633
18.2
RHH5296_R3662
19.5
Vd2 gdTCR nTPM: 18.6
Samples: 4
Max nTPM: 27.1
Min nTPM: 12.3
RHH5234_R3606
16.1
RHH5206_R3577
12.3
RHH5263_R3635
27.1
RHH5298_R3664
18.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
