HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:72.3 nTPM
HPA Brain:141.6 nTPM
GTEx:72.3 nTPM
FANTOM5:0.5 Scaled Tags Per Million
Pig:72.2 nTPM
Mouse:92.7 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049809
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 141.6
Sample id Sample description nTPM
Hippocampus
nTPM: 137.3
2529 Female, age 94, left hemisphere 154.8
1911 Female, age 85, right hemisphere 147.2
1855 Male, age 76, left hemisphere 139.1
2148 Female, age 91, left hemisphere 138.3
2621 Female, age 67, right hemisphere 137.4
1898 Male, age 80, left hemisphere 107.1
Dentate gyrus
nTPM: 135.0
2530 Female, age 94, left hemisphere 164.0
2531 Female, age 67, both hemispheres 135.3
2010 Male, age 76, both hemispheres 134.9
1927 Female, age 91, both hemispheres 131.2
2246 Female, age 85, both hemispheres 128.2
2528 Male, age 74, both hemispheres 116.4
Entorhinal gyrus
nTPM: 133.9
2613 Female, age 94, left hemisphere 155.6
2686 Male, age 75, right hemisphere 141.3
2764 Male, age 80, right hemisphere 134.6
2117 Female, age 91, right hemisphere 132.7
1787 Male, age 76, left hemisphere 121.9
1938 Female, age 85, left hemisphere 117.3
Hippocampus, CA1
nTPM: 129.9
2749 Male, age 80, left hemisphere 140.9
2527 Male, age 74, both hemispheres 131.3
2045 Male, age 76, both hemispheres 129.0
2082 Female, age 91, right hemisphere 125.6
1873 Female, age 85, both hemispheres 122.8
Hippocampus, CA2
nTPM: 128.4
2437 Female, age 94, left hemisphere 149.1
1963 Male, age 80, left hemisphere 147.3
2113 Female, age 91, right hemisphere 131.6
1892 Male, age 76, both hemispheres 118.0
2249 Male, age 74, both hemispheres 112.7
1940 Female, age 85, left hemisphere 111.6
Hippocampus, CA3
nTPM: 126.7
2620 Female, age 94, left hemisphere 142.8
2861 Female, age 67, both hemispheres 136.0
2137 Male, age 80, left hemisphere 131.2
1891 Female, age 85, both hemispheres 127.3
1867 Male, age 76, both hemispheres 120.9
2436 Male, age 74, both hemispheres 102.3
Parahippocampal cortex
nTPM: 122.4
2692 Male, age 74, both hemispheres 151.4
2532 Female, age 72, left hemisphere 132.4
2622 Female, age 67, right hemisphere 131.7
2018 Male, age 76, both hemispheres 130.5
1990 Female, age 91, right hemisphere 122.2
2245 Female, age 91, both hemispheres 120.8
1933 Female, age 85, both hemispheres 111.3
2250 Female, age 67, right hemisphere 109.4
1850 Male, age 80, both hemispheres 108.0
2693 Female, age 94, both hemispheres 106.5
Perirhinal gyrus
nTPM: 103.8
1847 Female, age 91, left hemisphere 118.8
2521 Female, age 94, right hemisphere 111.9
2848 Male, age 76, right hemisphere 100.7
1794 Male, age 80, right hemisphere 97.1
1841 Female, age 85, right hemisphere 90.4
Subiculum
nTPM: 141.6
2438 Female, age 94, left hemisphere 158.3
2042 Male, age 76, both hemispheres 151.4
2619 Male, age 74, both hemispheres 139.9
1901 Male, age 80, both hemispheres 139.8
2729 Female, age 91, right hemisphere 130.3
1977 Female, age 85, both hemispheres 130.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.3
Samples: 197

Max nTPM: 132.3
Min nTPM: 19.3
Std nTPM: 21.7
Median nTPM: 69.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 132.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 131.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 129.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 125.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 122.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 118.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 117.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 115.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 114.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 112.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 111.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.5
FF:10153-102I9 76 years, female 1.0
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.2
Pig sample Sample description nTPM
Subiculum
nTPM: 49.4
Samples: 4

Max nTPM: 71.3
Min nTPM: 34.4
Sample A Female 71.3
Sample B Female 46.1
Sample C Male 45.8
Sample D Male 34.4
Dorsal hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 105.1
Min nTPM: 50.5
Sample A Female 105.1
Sample B Female 81.9
Sample C Male 51.2
Sample D Male 50.5
Entorhinal cortex
nTPM: 48.9
Samples: 4

Max nTPM: 54.8
Min nTPM: 42.0
Sample A Female 50.1
Sample B Female 48.8
Sample C Male 54.8
Sample D Male 42.0
Ventral hippocampus
nTPM: 66.3
Samples: 4

Max nTPM: 92.5
Min nTPM: 47.0
Sample A Female 56.5
Sample B Female 47.0
Sample C Male 69.3
Sample D Male 92.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.9
Samples: 4

Max nTPM: 75.8
Min nTPM: 66.0
Sample A Male 67.4
Sample B Male 66.5
Sample C Female 75.8
Sample D Female 66.0
Hippocampal formation
nTPM: 92.7
Samples: 4

Max nTPM: 101.6
Min nTPM: 86.4
Sample A Male 86.4
Sample B Male 96.2
Sample C Female 101.6
Sample D Female 86.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
68632002 Antisense, RP_050125_01_E06, Mouse strain C57BL/6J (56 days, male) 9.7

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