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RHOBTB1
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  • RHOBTB1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RHOBTB1
Synonyms KIAA0740
Gene descriptioni

Full gene name according to HGNC.

Rho related BTB domain containing 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband q21.2
Chromosome location (bp) 60869438 - 61001440
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000072422 (version 109)
Entrez gene 9886
HGNC HGNC:18738
UniProt O94844 (UniProt - Evidence at protein level)
neXtProt NX_O94844
GeneCards RHOBTB1
Antibodypedia RHOBTB1 antibodies


PROTEIN FUNCTION
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

GTP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene belongs to the Rho family of the small GTPase superfamily. It contains a GTPase domain, a proline-rich region, a tandem of 2 BTB (broad complex, tramtrack, and bric-a-brac) domains, and a conserved C-terminal region. The protein plays a role in small GTPase-mediated signal transduction and the organization of the actin filament system. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Dec 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RHOBTB1-201
ENSP00000338671
ENST00000337910
O94844
[Direct mapping] Rho-related BTB domain-containing protein 1
Show all
A0A024QZL4
[Target identity:100%; Query identity:100%] Rho-related BTB domain containing 1, isoform CRA_c
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000166 [nucleotide binding]
GO:0003924 [GTPase activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0007015 [actin filament organization]
GO:0007163 [establishment or maintenance of cell polarity]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008360 [regulation of cell shape]
GO:0010008 [endosome membrane]
GO:0019901 [protein kinase binding]
GO:0030865 [cortical cytoskeleton organization]
GO:0031410 [cytoplasmic vesicle]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0042995 [cell projection]
GO:0043652 [engulfment of apoptotic cell]
Show all
696 aa
79.4 kDa
No 0
RHOBTB1-202
ENSP00000350595
ENST00000357917
O94844
[Direct mapping] Rho-related BTB domain-containing protein 1
Show all
A0A024QZL4
[Target identity:100%; Query identity:100%] Rho-related BTB domain containing 1, isoform CRA_c
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000166 [nucleotide binding]
GO:0003924 [GTPase activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0007015 [actin filament organization]
GO:0007163 [establishment or maintenance of cell polarity]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008360 [regulation of cell shape]
GO:0010008 [endosome membrane]
GO:0019901 [protein kinase binding]
GO:0030865 [cortical cytoskeleton organization]
GO:0031410 [cytoplasmic vesicle]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0042995 [cell projection]
GO:0043652 [engulfment of apoptotic cell]
Show all
696 aa
79.4 kDa
No 0

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