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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.6
nTPM
Monaco:
87.1
nTPM
Schmiedel:
173.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.6
HPA sample
nTPM
gdT-cell nTPM: 84.6
Samples: 6
Max nTPM: 111.3
Min nTPM: 66.8
P10809_1007
81.2
P10809_1022
104.5
P10809_1041
111.3
P10809_1060
67.5
P10809_1077
76.1
P10809_1098
66.8
MAIT T-cell nTPM: 86.8
Samples: 6
Max nTPM: 106.7
Min nTPM: 72.2
P10809_1006
77.5
P10809_1024
91.5
P10809_1043
100.1
P10809_1062
72.8
P10809_1083
72.2
P10809_1097
106.7
Memory CD4 T-cell nTPM: 77.9
Samples: 6
Max nTPM: 99.6
Min nTPM: 61.6
P10809_1014
67.5
P10809_1026
99.6
P10809_1045
93.0
P10809_1064
72.9
P10809_1086
61.6
P10809_1113
72.6
Memory CD8 T-cell nTPM: 83.7
Samples: 5
Max nTPM: 98.2
Min nTPM: 65.5
P10809_1012
85.8
P10809_1027
89.4
P10809_1046
98.2
P10809_1065
79.6
P10809_1111
65.5
Naive CD4 T-cell nTPM: 64.3
Samples: 6
Max nTPM: 85.5
Min nTPM: 54.0
P10809_1015
54.0
P10809_1030
66.6
P10809_1049
85.5
P10809_1068
68.6
P10809_1085
54.1
P10809_1112
57.0
Naive CD8 T-cell nTPM: 67.7
Samples: 6
Max nTPM: 82.9
Min nTPM: 59.0
P10809_1016
65.3
P10809_1031
59.0
P10809_1050
82.9
P10809_1069
66.5
P10809_1087
71.0
P10809_1110
61.3
T-reg nTPM: 114.6
Samples: 6
Max nTPM: 135.0
Min nTPM: 94.6
P10809_1018
94.6
P10809_1037
135.0
P10809_1056
127.0
P10809_1075
121.5
P10809_1094
111.7
P10809_1106
97.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 48.3
Samples: 4
Max nTPM: 80.1
Min nTPM: 26.7
RHH5202_R3573
53.0
RHH5230_R3602
33.5
RHH5259_R3631
26.7
RHH5288_R3660
80.1
Effector memory CD8 T-cell nTPM: 56.4
Samples: 4
Max nTPM: 75.6
Min nTPM: 39.3
RHH5203_R3574
75.6
RHH5231_R3603
67.0
RHH5260_R3632
43.7
RHH5289_R3661
39.3
MAIT T-cell nTPM: 46.3
Samples: 4
Max nTPM: 68.3
Min nTPM: 36.1
RHH5233_R3605
37.9
RHH5205_R3576
36.1
RHH5262_R3634
42.7
RHH5297_R3663
68.3
Memory CD4 T-cell TFH nTPM: 51.8
Samples: 4
Max nTPM: 72.8
Min nTPM: 36.8
RHH5300_R3666
57.4
RHH5236_R3608
72.8
RHH5265_R3637
36.8
RHH5208_R3579
40.1
Memory CD4 T-cell Th1 nTPM: 56.5
Samples: 4
Max nTPM: 105.6
Min nTPM: 38.7
RHH5210_R3581
41.2
RHH5302_R3668
105.6
RHH5238_R3610
38.7
RHH5267_R3639
40.6
Memory CD4 T-cell Th1/Th17 nTPM: 54.6
Samples: 4
Max nTPM: 100.8
Min nTPM: 15.1
RHH5303_R3669
100.8
RHH5211_R3582
70.2
RHH5239_R3611
15.1
RHH5268_R3640
32.3
Memory CD4 T-cell Th17 nTPM: 37.1
Samples: 4
Max nTPM: 57.4
Min nTPM: 21.6
RHH5304_R3670
41.3
RHH5212_R3583
57.4
RHH5240_R3612
21.6
RHH5269_R3641
28.2
Memory CD4 T-cell Th2 nTPM: 43.7
Samples: 4
Max nTPM: 61.6
Min nTPM: 33.0
RHH5305_R3671
42.7
RHH5213_R3584
33.0
RHH5241_R3613
61.6
RHH5270_R3642
37.5
Naive CD4 T-cell nTPM: 36.8
Samples: 4
Max nTPM: 53.5
Min nTPM: 24.0
RHH5306_R3672
44.3
RHH5214_R3585
53.5
RHH5242_R3614
25.4
RHH5271_R3643
24.0
Naive CD8 T-cell nTPM: 34.4
Samples: 4
Max nTPM: 55.9
Min nTPM: 14.1
RHH5201_R3572
34.9
RHH5229_R3601
14.1
RHH5258_R3630
55.9
RHH5287_R3659
32.5
Non-Vd2 gdTCR nTPM: 63.4
Samples: 4
Max nTPM: 103.3
Min nTPM: 31.5
RHH5235_R3607
31.5
RHH5264_R3636
75.1
RHH5207_R3578
43.7
RHH5299_R3665
103.3
T-reg nTPM: 59.3
Samples: 4
Max nTPM: 84.7
Min nTPM: 31.7
RHH5301_R3667
84.7
RHH5237_R3609
83.8
RHH5266_R3638
31.7
RHH5209_R3580
37.1
Terminal effector memory CD4 T-cell nTPM: 41.0
Samples: 2
Max nTPM: 50.7
Min nTPM: 31.3
RHH5243_R3615
31.3
RHH5272_R3644
50.7
Terminal effector memory CD8 T-cell nTPM: 87.1
Samples: 4
Max nTPM: 131.0
Min nTPM: 48.3
RHH5232_R3604
59.2
RHH5204_R3575
131.0
RHH5261_R3633
48.3
RHH5296_R3662
110.0
Vd2 gdTCR nTPM: 73.3
Samples: 4
Max nTPM: 106.4
Min nTPM: 43.6
RHH5234_R3606
48.4
RHH5206_R3577
106.4
RHH5263_R3635
43.6
RHH5298_R3664
94.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
