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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
43.9
nTPM
Monaco:
102.2
nTPM
Schmiedel:
191.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.9
HPA sample
nTPM
gdT-cell nTPM: 39.2
Samples: 6
Max nTPM: 54.9
Min nTPM: 8.6
P10809_1007
54.9
P10809_1022
44.1
P10809_1041
51.0
P10809_1060
8.6
P10809_1077
39.6
P10809_1098
36.9
MAIT T-cell nTPM: 35.7
Samples: 6
Max nTPM: 62.4
Min nTPM: 12.0
P10809_1006
43.5
P10809_1024
24.1
P10809_1043
49.7
P10809_1062
12.0
P10809_1083
22.7
P10809_1097
62.4
Memory CD4 T-cell nTPM: 32.6
Samples: 6
Max nTPM: 56.7
Min nTPM: 5.7
P10809_1014
31.1
P10809_1026
47.8
P10809_1045
56.7
P10809_1064
37.8
P10809_1086
16.2
P10809_1113
5.7
Memory CD8 T-cell nTPM: 43.9
Samples: 5
Max nTPM: 83.7
Min nTPM: 26.1
P10809_1012
42.3
P10809_1027
26.1
P10809_1046
83.7
P10809_1065
31.8
P10809_1111
35.4
Naive CD4 T-cell nTPM: 23.8
Samples: 6
Max nTPM: 33.4
Min nTPM: 15.2
P10809_1015
19.3
P10809_1030
25.5
P10809_1049
33.4
P10809_1068
19.4
P10809_1085
30.0
P10809_1112
15.2
Naive CD8 T-cell nTPM: 29.2
Samples: 6
Max nTPM: 44.5
Min nTPM: 9.0
P10809_1016
16.9
P10809_1031
42.0
P10809_1050
32.5
P10809_1069
44.5
P10809_1087
9.0
P10809_1110
30.1
T-reg nTPM: 31.8
Samples: 6
Max nTPM: 56.9
Min nTPM: 19.1
P10809_1018
21.8
P10809_1037
51.7
P10809_1056
56.9
P10809_1075
20.4
P10809_1094
19.1
P10809_1106
21.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.9
Samples: 4
Max nTPM: 101.2
Min nTPM: 26.4
RHH5202_R3573
26.4
RHH5230_R3602
101.2
RHH5259_R3631
77.5
RHH5288_R3660
42.6
Effector memory CD8 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 143.8
Min nTPM: 44.2
RHH5203_R3574
56.8
RHH5231_R3603
143.8
RHH5260_R3632
116.0
RHH5289_R3661
44.2
MAIT T-cell nTPM: 73.4
Samples: 4
Max nTPM: 102.1
Min nTPM: 44.2
RHH5233_R3605
44.2
RHH5205_R3576
97.3
RHH5262_R3634
102.1
RHH5297_R3663
49.8
Memory CD4 T-cell TFH nTPM: 61.1
Samples: 4
Max nTPM: 106.4
Min nTPM: 19.0
RHH5300_R3666
85.7
RHH5236_R3608
106.4
RHH5265_R3637
33.4
RHH5208_R3579
19.0
Memory CD4 T-cell Th1 nTPM: 69.9
Samples: 4
Max nTPM: 98.3
Min nTPM: 41.9
RHH5210_R3581
44.5
RHH5302_R3668
41.9
RHH5238_R3610
95.0
RHH5267_R3639
98.3
Memory CD4 T-cell Th1/Th17 nTPM: 80.8
Samples: 4
Max nTPM: 100.8
Min nTPM: 41.3
RHH5303_R3669
41.3
RHH5211_R3582
84.8
RHH5239_R3611
100.8
RHH5268_R3640
96.1
Memory CD4 T-cell Th17 nTPM: 66.8
Samples: 4
Max nTPM: 85.1
Min nTPM: 49.0
RHH5304_R3670
49.0
RHH5212_R3583
85.1
RHH5240_R3612
54.2
RHH5269_R3641
78.7
Memory CD4 T-cell Th2 nTPM: 67.8
Samples: 4
Max nTPM: 96.4
Min nTPM: 33.0
RHH5305_R3671
56.2
RHH5213_R3584
96.4
RHH5241_R3613
33.0
RHH5270_R3642
85.7
Naive CD4 T-cell nTPM: 60.6
Samples: 4
Max nTPM: 70.1
Min nTPM: 41.2
RHH5306_R3672
70.1
RHH5214_R3585
62.9
RHH5242_R3614
41.2
RHH5271_R3643
68.3
Naive CD8 T-cell nTPM: 61.5
Samples: 4
Max nTPM: 82.1
Min nTPM: 21.8
RHH5201_R3572
21.8
RHH5229_R3601
67.0
RHH5258_R3630
82.1
RHH5287_R3659
75.2
Non-Vd2 gdTCR nTPM: 97.5
Samples: 4
Max nTPM: 198.5
Min nTPM: 31.7
RHH5235_R3607
198.5
RHH5264_R3636
31.7
RHH5207_R3578
40.0
RHH5299_R3665
119.8
T-reg nTPM: 93.4
Samples: 4
Max nTPM: 115.4
Min nTPM: 80.2
RHH5301_R3667
89.1
RHH5237_R3609
115.4
RHH5266_R3638
89.0
RHH5209_R3580
80.2
Terminal effector memory CD4 T-cell nTPM: 102.2
Samples: 2
Max nTPM: 155.4
Min nTPM: 49.0
RHH5243_R3615
155.4
RHH5272_R3644
49.0
Terminal effector memory CD8 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 120.4
Min nTPM: 41.6
RHH5232_R3604
81.5
RHH5204_R3575
75.1
RHH5261_R3633
120.4
RHH5296_R3662
41.6
Vd2 gdTCR nTPM: 94.3
Samples: 4
Max nTPM: 122.7
Min nTPM: 53.8
RHH5234_R3606
110.2
RHH5206_R3577
53.8
RHH5263_R3635
90.5
RHH5298_R3664
122.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
