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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.6
nTPM
Monaco:
233.1
nTPM
Schmiedel:
332.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.6
HPA sample
nTPM
gdT-cell nTPM: 36.6
Samples: 6
Max nTPM: 47.8
Min nTPM: 23.7
P10809_1007
47.8
P10809_1022
42.6
P10809_1041
23.7
P10809_1060
38.5
P10809_1077
27.5
P10809_1098
39.5
MAIT T-cell nTPM: 26.9
Samples: 6
Max nTPM: 48.1
Min nTPM: 15.6
P10809_1006
48.1
P10809_1024
19.4
P10809_1043
27.6
P10809_1062
28.8
P10809_1083
15.6
P10809_1097
21.9
Memory CD4 T-cell nTPM: 19.3
Samples: 6
Max nTPM: 32.9
Min nTPM: 13.2
P10809_1014
32.9
P10809_1026
14.6
P10809_1045
17.8
P10809_1064
18.0
P10809_1086
13.2
P10809_1113
19.4
Memory CD8 T-cell nTPM: 26.3
Samples: 5
Max nTPM: 46.9
Min nTPM: 16.4
P10809_1012
46.9
P10809_1027
18.9
P10809_1046
27.9
P10809_1065
16.4
P10809_1111
21.6
Naive CD4 T-cell nTPM: 11.1
Samples: 6
Max nTPM: 18.1
Min nTPM: 5.2
P10809_1015
18.1
P10809_1030
11.4
P10809_1049
5.2
P10809_1068
9.8
P10809_1085
9.6
P10809_1112
12.2
Naive CD8 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 32.1
Min nTPM: 14.8
P10809_1016
22.3
P10809_1031
32.1
P10809_1050
16.4
P10809_1069
14.8
P10809_1087
17.3
P10809_1110
17.3
T-reg nTPM: 26.8
Samples: 6
Max nTPM: 55.6
Min nTPM: 15.1
P10809_1018
55.6
P10809_1037
21.4
P10809_1056
23.9
P10809_1075
15.1
P10809_1094
27.9
P10809_1106
16.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
233.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 143.4
Samples: 4
Max nTPM: 189.3
Min nTPM: 123.5
RHH5202_R3573
131.4
RHH5230_R3602
129.2
RHH5259_R3631
189.3
RHH5288_R3660
123.5
Effector memory CD8 T-cell nTPM: 226.9
Samples: 4
Max nTPM: 239.1
Min nTPM: 213.2
RHH5203_R3574
217.9
RHH5231_R3603
213.2
RHH5260_R3632
239.1
RHH5289_R3661
237.2
MAIT T-cell nTPM: 154.3
Samples: 4
Max nTPM: 183.8
Min nTPM: 133.0
RHH5233_R3605
143.0
RHH5205_R3576
183.8
RHH5262_R3634
157.2
RHH5297_R3663
133.0
Memory CD4 T-cell TFH nTPM: 130.6
Samples: 4
Max nTPM: 135.1
Min nTPM: 123.7
RHH5300_R3666
123.7
RHH5236_R3608
130.5
RHH5265_R3637
133.0
RHH5208_R3579
135.1
Memory CD4 T-cell Th1 nTPM: 143.2
Samples: 4
Max nTPM: 196.7
Min nTPM: 112.0
RHH5210_R3581
112.0
RHH5302_R3668
125.2
RHH5238_R3610
196.7
RHH5267_R3639
138.9
Memory CD4 T-cell Th1/Th17 nTPM: 170.5
Samples: 4
Max nTPM: 198.0
Min nTPM: 157.0
RHH5303_R3669
161.6
RHH5211_R3582
165.3
RHH5239_R3611
198.0
RHH5268_R3640
157.0
Memory CD4 T-cell Th17 nTPM: 169.1
Samples: 4
Max nTPM: 210.1
Min nTPM: 145.9
RHH5304_R3670
145.9
RHH5212_R3583
160.5
RHH5240_R3612
210.1
RHH5269_R3641
159.7
Memory CD4 T-cell Th2 nTPM: 122.1
Samples: 4
Max nTPM: 129.9
Min nTPM: 111.9
RHH5305_R3671
123.9
RHH5213_R3584
122.5
RHH5241_R3613
111.9
RHH5270_R3642
129.9
Naive CD4 T-cell nTPM: 93.2
Samples: 4
Max nTPM: 113.8
Min nTPM: 77.8
RHH5306_R3672
86.9
RHH5214_R3585
77.8
RHH5242_R3614
113.8
RHH5271_R3643
94.2
Naive CD8 T-cell nTPM: 106.9
Samples: 4
Max nTPM: 152.7
Min nTPM: 86.6
RHH5201_R3572
86.6
RHH5229_R3601
152.7
RHH5258_R3630
91.4
RHH5287_R3659
97.0
Non-Vd2 gdTCR nTPM: 217.3
Samples: 4
Max nTPM: 242.6
Min nTPM: 183.8
RHH5235_R3607
219.2
RHH5264_R3636
223.5
RHH5207_R3578
242.6
RHH5299_R3665
183.8
T-reg nTPM: 114.1
Samples: 4
Max nTPM: 128.3
Min nTPM: 100.9
RHH5301_R3667
100.9
RHH5237_R3609
105.5
RHH5266_R3638
128.3
RHH5209_R3580
121.6
Terminal effector memory CD4 T-cell nTPM: 233.1
Samples: 2
Max nTPM: 253.9
Min nTPM: 212.3
RHH5243_R3615
253.9
RHH5272_R3644
212.3
Terminal effector memory CD8 T-cell nTPM: 226.1
Samples: 4
Max nTPM: 265.8
Min nTPM: 167.5
RHH5232_R3604
244.4
RHH5204_R3575
167.5
RHH5261_R3633
265.8
RHH5296_R3662
226.8
Vd2 gdTCR nTPM: 152.6
Samples: 4
Max nTPM: 173.9
Min nTPM: 128.1
RHH5234_R3606
152.0
RHH5206_R3577
156.4
RHH5263_R3635
173.9
RHH5298_R3664
128.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
