HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:58.0 nTPM
HPA Brain:112.0 nTPM
GTEx:58.0 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Pig:150.0 nTPM
Mouse:160.5 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035640Antibody CAB037313
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.0
Sample id Sample description nTPM
Hippocampus
nTPM: 92.4
1898 Male, age 80, left hemisphere 105.5
2148 Female, age 91, left hemisphere 98.8
2621 Female, age 67, right hemisphere 94.3
1855 Male, age 76, left hemisphere 91.8
2529 Female, age 94, left hemisphere 87.4
1911 Female, age 85, right hemisphere 76.6
Dentate gyrus
nTPM: 96.2
1927 Female, age 91, both hemispheres 116.6
2530 Female, age 94, left hemisphere 98.8
2531 Female, age 67, both hemispheres 92.4
2528 Male, age 74, both hemispheres 90.6
2010 Male, age 76, both hemispheres 90.2
2246 Female, age 85, both hemispheres 88.6
Entorhinal gyrus
nTPM: 88.1
2613 Female, age 94, left hemisphere 98.4
2764 Male, age 80, right hemisphere 97.0
1938 Female, age 85, left hemisphere 93.9
1787 Male, age 76, left hemisphere 93.2
2117 Female, age 91, right hemisphere 74.8
2686 Male, age 75, right hemisphere 71.6
Hippocampus, CA1
nTPM: 112.0
2749 Male, age 80, left hemisphere 181.7
1873 Female, age 85, both hemispheres 106.1
2527 Male, age 74, both hemispheres 101.4
2045 Male, age 76, both hemispheres 96.3
2082 Female, age 91, right hemisphere 74.3
Hippocampus, CA2
nTPM: 88.1
1963 Male, age 80, left hemisphere 114.8
1892 Male, age 76, both hemispheres 101.8
2437 Female, age 94, left hemisphere 83.7
1940 Female, age 85, left hemisphere 77.0
2249 Male, age 74, both hemispheres 76.9
2113 Female, age 91, right hemisphere 74.7
Hippocampus, CA3
nTPM: 99.8
2137 Male, age 80, left hemisphere 146.0
2620 Female, age 94, left hemisphere 121.2
2861 Female, age 67, both hemispheres 95.5
1867 Male, age 76, both hemispheres 85.4
2436 Male, age 74, both hemispheres 78.5
1891 Female, age 85, both hemispheres 72.1
Parahippocampal cortex
nTPM: 84.2
2245 Female, age 91, both hemispheres 100.6
1990 Female, age 91, right hemisphere 98.7
2250 Female, age 67, right hemisphere 96.4
1850 Male, age 80, both hemispheres 93.3
1933 Female, age 85, both hemispheres 91.1
2532 Female, age 72, left hemisphere 77.1
2622 Female, age 67, right hemisphere 75.1
2693 Female, age 94, both hemispheres 74.4
2018 Male, age 76, both hemispheres 68.8
2692 Male, age 74, both hemispheres 66.3
Perirhinal gyrus
nTPM: 109.8
1847 Female, age 91, left hemisphere 149.3
2521 Female, age 94, right hemisphere 114.3
1794 Male, age 80, right hemisphere 106.3
1841 Female, age 85, right hemisphere 98.8
2848 Male, age 76, right hemisphere 80.3
Subiculum
nTPM: 79.4
1977 Female, age 85, both hemispheres 94.7
1901 Male, age 80, both hemispheres 87.5
2619 Male, age 74, both hemispheres 83.9
2729 Female, age 91, right hemisphere 77.0
2438 Female, age 94, left hemisphere 72.4
2042 Male, age 76, both hemispheres 60.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.0
Samples: 197

Max nTPM: 169.2
Min nTPM: 8.7
Std nTPM: 30.7
Median nTPM: 53.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 169.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 153.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 138.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 135.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 134.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 127.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 124.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 121.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 118.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 116.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 116.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.1
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 150.0
Pig sample Sample description nTPM
Subiculum
nTPM: 145.5
Samples: 4

Max nTPM: 170.2
Min nTPM: 124.1
Sample A Female 170.2
Sample B Female 124.1
Sample C Male 147.6
Sample D Male 140.2
Dorsal hippocampus
nTPM: 149.6
Samples: 4

Max nTPM: 182.5
Min nTPM: 109.7
Sample A Female 182.5
Sample B Female 176.8
Sample C Male 109.7
Sample D Male 129.3
Entorhinal cortex
nTPM: 140.0
Samples: 4

Max nTPM: 156.5
Min nTPM: 116.4
Sample A Female 155.4
Sample B Female 116.4
Sample C Male 156.5
Sample D Male 131.8
Ventral hippocampus
nTPM: 150.0
Samples: 4

Max nTPM: 188.4
Min nTPM: 96.4
Sample A Female 142.3
Sample B Female 96.4
Sample C Male 188.4
Sample D Male 172.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 160.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.5
Samples: 4

Max nTPM: 154.9
Min nTPM: 111.9
Sample A Male 111.9
Sample B Male 119.0
Sample C Female 124.1
Sample D Female 154.9
Hippocampal formation
nTPM: 160.5
Samples: 4

Max nTPM: 177.3
Min nTPM: 144.9
Sample A Male 147.5
Sample B Male 172.3
Sample C Female 177.3
Sample D Female 144.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
73512561 Antisense, RP_050921_01_B04, Mouse strain C57BL/6J (56 days, male) 6.8

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